HHSEARCH alignment of GI: 254780258 and SCOP domain: d2qamc2

Alignment

Probab=99.85  E-value=2.3e-23  Score=170.77  Aligned_cols=64  Identities=55%  Similarity=0.910  Sum_probs=61.2

Q ss_pred             EEEEEEEECCCCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEECCCCCCCCCEEEECCCCCCCC
Q ss_conf             68798863377760478876415885258898414776346751645661045788366676757
Q gi|254780258|r   62 YRLVDFKRGEYGLEGVVKRLEYDPNRTAFIALISYSNGSLAYILAPQRLSVGDKVISSDSAVDVK  126 (278)
Q Consensus        62 yR~IDf~r~~~~~~~~V~~IeYDPnRsa~IALv~~~~g~~~YIlAp~gl~vGd~I~s~~~~~~i~  126 (278)
                      ||+|||+|++.+++|+|++|||||||||+||||+|+||+++|||||+||++||.|+|+.++ ||+
T Consensus         1 YR~IDF~R~k~~i~g~V~~IEYDPnRsA~IALv~y~dG~k~Yilap~gl~vGd~I~sg~~a-~Ik   64 (64)
T d2qamc2           1 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERRYILAPKGLKAGDQIQSGVDA-AIK   64 (64)
T ss_dssp             CCCCCSCCCCCSCCEECCCCCCCSSSSSCCBCCCBTTSCCCCBCCBSSCCTTCEECCSSSC-CSS
T ss_pred             CCEEEEEECCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCEEEECCCC-CCC
T ss_conf             9749454886998799999896799981589999479969999856999899999879898-879

SCOP domain information

class: All beta proteins
fold: OB-fold
superfamily: Nucleic acid-binding proteins
family: Cold shock DNA-binding domain-like
domain: N-terminal domain of ribosomal protein L2
species: Escherichia coli [TaxId: 562]