PSIBLAST alignment of GI: 254780258 and protein with PDB id: 2aw4
gi|83754064|pdb|2AW4|C Chain C, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. Length = 273
>gi|83754120|pdb|2AWB|C Chain C, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. Length = 273
Score = 339 bits (869), Expect = 3e-91, Method: Composition-based stats.
Identities = 155/275 (56%), Positives = 188/275 (68%), Gaps = 2/275 (0%)
Query: 1 MALKNFNPDTSGRRQLVMVDRNSLHSGKPIKSLTRGLCSKGGRNNTGRVTMRFRGGGHKN 60
MA+ P + GRR +V V LH GKP L GGRNN GR+T R GGGHK
Sbjct: 1 MAVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLLEKNSKSGGRNNNGRITTRHIGGGHKQ 60
Query: 61 RYRLVDFKRGEYGLEGVVKRLEYDPNRTAFIALISYSNGSLAYILAPQRLSVGDKVISSD 120
YR+VDFKR + G+ VV+RLEYDPNR+A IAL+ Y +G YILAP+ L GD++ S
Sbjct: 61 AYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERRYILAPKGLKAGDQIQSGV 120
Query: 121 SAVDVKPGNAMPLRFIPVGSIVHNVEMKPGKGGQISRSAGSYARLVERDRSRALLRLSSG 180
A +KPGN +P+R IPVGS VHNVEMKPGKGGQ++RSAG+Y ++V RD + LRL SG
Sbjct: 121 DAA-IKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVARDGAYVTLRLRSG 179
Query: 181 EMRFVHSSCMASIGAVSNQDHSNVNHAKAGRARWLGMRSHVRGVAMNPVDHPHGGGEGKT 240
EMR V + C A++G V N +H KAG ARW G+R VRG AMNPVDHPHGGGEG+
Sbjct: 180 EMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGRN 239
Query: 241 SGGRNPCSPWGKLTKGKRTRSNKSTDVFIARSRHK 275
G++P +PWG TKGK+TRSNK TD FI R R K
Sbjct: 240 F-GKHPVTPWGVQTKGKKTRSNKRTDKFIVRRRSK 273