PSIBLAST alignment of GI: 254780258 and protein with PDB id: 3pyo
>gi|322812574|pdb|3PYO|C Chain C, Crystal Structure Of A Complex Containing Domain 3 From The Psiv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 50s Subunit Of The First 70s Ribosome. Length = 271
>gi|322812627|pdb|3PYR|C Chain C, Crystal Structure Of A Complex Containing Domain 3 From The Psiv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 50s Subunit Of The Second 70s Ribosome. Length = 271
Score = 341 bits (875), Expect = 7e-92, Method: Composition-based stats.
Identities = 140/271 (51%), Positives = 185/271 (68%), Gaps = 3/271 (1%)
Query: 2 ALKNFNPDTSGRRQLVMVDRNSLHSGKPIKSLTRGLCSKGGRNNTGRVTMRFRGGGHKNR 61
A+K F P T RR + + D + + +P KSL + L GGRNN GR+T+RFRGGGHK
Sbjct: 1 AVKKFKPYTPSRRFMTVADFSEITKTEPEKSLVKPLKKTGGRNNQGRITVRFRGGGHKRL 60
Query: 62 YRLVDFKRGEYG-LEGVVKRLEYDPNRTAFIALISYSNGSLAYILAPQRLSVGDKVISSD 120
YR++DFKR + + V +EYDPNR+A IAL+ Y +G YI+AP L VG +V++
Sbjct: 61 YRIIDFKRWDKVGIPAKVAAIEYDPNRSARIALLHYVDGEKRYIIAPDGLQVGQQVVAGP 120
Query: 121 SAVDVKPGNAMPLRFIPVGSIVHNVEMKPGKGGQISRSAGSYARLVERDRSRALLRLSSG 180
A ++ GNA+PLRFIPVG++VH VE++P KG +++R+AG+ A++ R+ +LRL SG
Sbjct: 121 DA-PIQVGNALPLRFIPVGTVVHAVELEPKKGAKLARAAGTSAQIQGREGDYVILRLPSG 179
Query: 181 EMRFVHSSCMASIGAVSNQDHSNVNHAKAGRARWLGMRSHVRGVAMNPVDHPHGGGEGKT 240
E+R VH C A++GAV N DH N+ KAGR+RWLG R HVRG AMNPVDHPHGGGEG+
Sbjct: 180 ELRKVHGECYATVGAVGNADHKNIVLGKAGRSRWLGRRPHVRGAAMNPVDHPHGGGEGRA 239
Query: 241 SGGRNPCSPWGKLTKGKRTRS-NKSTDVFIA 270
GR P SPWG TKG +TR K + FI
Sbjct: 240 PRGRPPASPWGWQTKGLKTRKRRKPSSRFII 270