RPSBLAST alignment of GI: 254780258 and MMDB domain: 2j01_D_49-276

>2j01_D (D:49-276) 50S ribosomal protein L2; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus}Length = 228
 Score =  224 bits (573), Expect = 7e-60
 Identities = 123/229 (53%), Positives = 161/229 (70%), Gaps = 3/229 (1%)

Query: 49  VTMRFRGGGHKNRYRLVDFKRGE-YGLEGVVKRLEYDPNRTAFIALISYSNGSLAYILAP 107
           +T+RFRGGGHK  YR++DFKR +  G+   V  +EYDPNR+A IAL+ Y +G   YI+AP
Sbjct: 1   ITVRFRGGGHKRLYRIIDFKRWDKVGIPAKVAAIEYDPNRSARIALLHYVDGEKRYIIAP 60

Query: 108 QRLSVGDKVISSDSAVDVKPGNAMPLRFIPVGSIVHNVEMKPGKGGQISRSAGSYARLVE 167
             L VG +V++   A  ++ GNA+PLRFIPVG++VH VE++P KG +++R+AG+ A++  
Sbjct: 61  DGLQVGQQVVAGPDA-PIQVGNALPLRFIPVGTVVHAVELEPKKGAKLARAAGTSAQIQG 119

Query: 168 RDRSRALLRLSSGEMRFVHSSCMASIGAVSNQDHSNVNHAKAGRARWLGMRSHVRGVAMN 227
           R+    +LRL SGE+R VH  C A++GAV N DH N+   KAGR+RWLG R HVRG AMN
Sbjct: 120 REGDYVILRLPSGELRKVHGECYATVGAVGNADHKNIVLGKAGRSRWLGRRPHVRGAAMN 179

Query: 228 PVDHPHGGGEGKTSGGRNPCSPWGKLTKGKRTRS-NKSTDVFIARSRHK 275
           PVDHPHGGGEG+   GR P SPWG  TKG +TR   K +  FI   R K
Sbjct: 180 PVDHPHGGGEGRAPRGRPPASPWGWQTKGLKTRKRRKPSSRFIIARRKK 228