RPSBLAST alignment of GI: 254780258 and protein with PDBid: 1vq8
>1vq8_A 50S ribosomal protein L2P; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: b.34.5.3 b.40.4.5 PDB: 1vq4_A* 1vq5_A* 1vq6_A* 1vq7_A* 1s72_A* 1vq9_A* 1vqk_A* 1vql_A* 1vqm_A* 1vqn_A* 1vqo_A* 1vqp_A* 1yhq_A* 1yi2_A* 1yij_A* 1yit_A* 1yj9_A* 1yjn_A* 1yjw_A* 2otj_A* ... Length = 240
Score = 197 bits (503), Expect = 2e-51
Identities = 80/226 (35%), Positives = 118/226 (52%), Gaps = 10/226 (4%)
Query: 47 GRVTMRFRGGGHKNRYRLVDFKR-GEYGLEGVVKRLEYDPNRTAFIALISYSNGSLAYIL 105
GR T FR H+ + L K + G V +E+DP R+A +A + + +G IL
Sbjct: 11 GRGTSTFRAPSHRYKADLEHRKVEDGDVIAGTVVDIEHDPARSAPVAAVEFEDGDRRLIL 70
Query: 106 APQRLSVGDKVISSDSAVDVKPGNAMPLRFIPVGSIVHNVEMKPGKGGQISRSAGSYARL 165
AP+ + VGD++ SA ++ PGN +PL IP G V NVE PG GG+ +R++G A+L
Sbjct: 71 APEGVGVGDELQVGVSA-EIAPGNTLPLAEIPEGVPVCNVESSPGDGGKFARASGVNAQL 129
Query: 166 VERDRSRALLRLSSGEMRFVHSSCMASIGAVSNQDHSNVNHAKAGRARWL-----GMRSH 220
+ DR+ A+++L SGEM+ + C A+IG V+ ++ KAG +
Sbjct: 130 LTHDRNVAVVKLPSGEMKRLDPQCRATIGVVAGGGRTDKPFVKAGNKHHKMKARGTKWPN 189
Query: 221 VRGVAMNPVDHPHGGGEGKTSGGRNPCS---PWGKLTKGKRTRSNK 263
VRGVAMN VDHP GGG + G S P G+ ++
Sbjct: 190 VRGVAMNAVDHPFGGGGRQHPGKPKSISRNAPPGRKVGDIASKRTG 235