RPSBLAST alignment of GI: 254780258 and protein with PDBid: 3i1n
>3i1n_C 50S ribosomal protein L2; ribosome structure, protein-RNA complex, acetylation, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA- binding, methylation; 3.19A {Escherichia coli k-12} PDB: 1vs8_C 2aw4_C 2awb_C 2vhm_C 2vhn_C 3bbx_C 3df2_C 3df4_C 1vs6_C 3i1p_C 3i1r_C 3i1t_C 3i20_C 3i22_C 2qam_C* 1p85_A 1p86_A 2i2v_C 2i2t_C* 2qao_C* ... Length = 273
Score = 274 bits (702), Expect = 2e-74
Identities = 155/275 (56%), Positives = 189/275 (68%), Gaps = 2/275 (0%)
Query: 1 MALKNFNPDTSGRRQLVMVDRNSLHSGKPIKSLTRGLCSKGGRNNTGRVTMRFRGGGHKN 60
MA+ P + GRR +V V LH GKP L GGRNN GR+T R GGGHK
Sbjct: 1 MAVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLLEKNSKSGGRNNNGRITTRHIGGGHKQ 60
Query: 61 RYRLVDFKRGEYGLEGVVKRLEYDPNRTAFIALISYSNGSLAYILAPQRLSVGDKVISSD 120
YR+VDFKR + G+ VV+RLEYDPNR+A IAL+ Y +G YILAP+ L GD++ S
Sbjct: 61 AYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERRYILAPKGLKAGDQIQSGV 120
Query: 121 SAVDVKPGNAMPLRFIPVGSIVHNVEMKPGKGGQISRSAGSYARLVERDRSRALLRLSSG 180
A +KPGN +P+R IPVGS VHNVEMKPGKGGQ++RSAG+Y ++V RD + LRL SG
Sbjct: 121 DA-AIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVARDGAYVTLRLRSG 179
Query: 181 EMRFVHSSCMASIGAVSNQDHSNVNHAKAGRARWLGMRSHVRGVAMNPVDHPHGGGEGKT 240
EMR V + C A++G V N +H KAG ARW G+R VRG AMNPVDHPHGGGEG+
Sbjct: 180 EMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR- 238
Query: 241 SGGRNPCSPWGKLTKGKRTRSNKSTDVFIARSRHK 275
+ G++P +PWG TKGK+TRSNK TD FI R R K
Sbjct: 239 NFGKHPVTPWGVQTKGKKTRSNKRTDKFIVRRRSK 273