RPSBLAST alignment of GI: 254780258 and SCOP domain: d2j01d2

Alignment

 Score =  137 bits (346), Expect = 1e-33
 Identities = 58/122 (47%), Positives = 79/122 (64%), Gaps = 1/122 (0%)

Query: 2   ALKNFNPDTSGRRQLVMVDRNSLHSGKPIKSLTRGLCSKGGRNNTGRVTMRFRGGGHKNR 61
           A+K F P T  RR + + D + +   +P KSL + L   GGRNN GR+T+RFRGGGHK  
Sbjct: 1   AVKKFKPYTPSRRFMTVADFSEITKTEPEKSLVKPLKKTGGRNNQGRITVRFRGGGHKRL 60

Query: 62  YRLVDFKRGEY-GLEGVVKRLEYDPNRTAFIALISYSNGSLAYILAPQRLSVGDKVISSD 120
           YR++DFKR +  G+   V  +EYDPNR+A IAL+ Y +G   YI+AP  L VG +V++  
Sbjct: 61  YRIIDFKRWDKVGIPAKVAAIEYDPNRSARIALLHYVDGEKRYIIAPDGLQVGQQVVAGP 120

Query: 121 SA 122
            A
Sbjct: 121 DA 122

SCOP domain information

class: All beta proteins
fold: OB-fold
superfamily: Nucleic acid-binding proteins
family: Cold shock DNA-binding domain-like
domain: N-terminal domain of ribosomal protein L2
species: Thermus thermophilus [TaxId: 274]