HHsearch alignment for GI: 254780259 and conserved domain: CHL00030

Probab=100.00  E-value=4.6e-34  Score=217.34  Aligned_cols=90  Identities=40%  Similarity=0.535  Sum_probs=84.8

Q ss_pred             HHHHHHCCCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCC
Q ss_conf             86760032079988886489099998887898899999999968743378998518963331122466443223454443
Q gi|254780259|r    7 YDTIISPVIAEKSTLLAGQNQVVFNVKKDSSKSEIKSAVEALFSVKVVSVNTLIRKGKVKRLSRISAARSRVRSSRDMYV   86 (110)
Q Consensus         7 ~~vi~~P~~TEKs~~~~e~n~y~F~V~~~atK~eIK~ave~~f~V~V~~Vnt~~~~gK~Kr~~r~~g~k~~~~~~r~~~~   86 (110)
T Consensus         1 md~Ik~PviTEKs~~l~e~n~Y~F~V~~~a~K~eIK~aVE~~f~VkV~~Vnt~~~~gK~kr~g~~~-------------G   67 (92)
T CHL00030          1 MDGIKYPVFTDKSIRLLGKNQYTFNVDSGSTKTEIKHWIELFFGVKVIAMNSHRLPGKGRRMGPIL-------------G   67 (92)
T ss_pred             CCCCCCCEECHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCEEECCCC-------------E
T ss_conf             973233371486777777897999989999989999999987398799998187289744778944-------------4


Q ss_pred             CCCCCEEEEEECCCCCEECCCCC
Q ss_conf             45881389999589973133248
Q gi|254780259|r   87 SRKDVKRAFVTLAKGYSIDISAG  109 (110)
Q Consensus        87 k~~~~KKAiVtL~~G~~I~~~~g  109 (110)
T Consensus        68 ~~~~~KKAiVtL~~G~~I~~F~~   90 (92)
T CHL00030         68 HTMHYKRMIITLQPGYSIPLFRK   90 (92)
T ss_pred             ECCCCEEEEEEECCCCEECCCCC
T ss_conf             31798899999189798378878