HHsearch alignment for GI: 254780259 and conserved domain: COG0089

Probab=99.97  E-value=4.2e-31  Score=200.32  Aligned_cols=93  Identities=53%  Similarity=0.695  Sum_probs=85.3

Q ss_pred             HHHHHHHCCCCHHHHHHHH-CCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCCC
Q ss_conf             7867600320799888864-890999988878988999999999687433789985189633311224664432234544
Q gi|254780259|r    6 FYDTIISPVIAEKSTLLAG-QNQVVFNVKKDSSKSEIKSAVEALFSVKVVSVNTLIRKGKVKRLSRISAARSRVRSSRDM   84 (110)
Q Consensus         6 ~~~vi~~P~~TEKs~~~~e-~n~y~F~V~~~atK~eIK~ave~~f~V~V~~Vnt~~~~gK~Kr~~r~~g~k~~~~~~r~~   84 (110)
T Consensus         1 ~~dvI~~PvvTEKa~~l~~~~nk~vF~V~~~AtK~~IK~AvE~lF~VkV~kVNTl~~k~k~KR~~~------------k~   68 (94)
T COG0089           1 LYDVIKSPVVTEKAMLLMEKENKYVFIVDPDATKPEIKAAVEELFGVKVEKVNTLNTKGKTKRAGV------------KR   68 (94)
T ss_pred             CCCHHHCCCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCEEEEEEEEEECCCCEEEEC------------CC
T ss_conf             922444350058789767557879999989899799999999985987788887872896038840------------35


Q ss_pred             CCCCCCCEEEEEECCCCCEECCCCCC
Q ss_conf             43458813899995899731332489
Q gi|254780259|r   85 YVSRKDVKRAFVTLAKGYSIDISAGV  110 (110)
Q Consensus        85 ~~k~~~~KKAiVtL~~G~~I~~~~gi  110 (110)
T Consensus        69 ~G~~~~~kka~V~l~~G~~i~~~~~~   94 (94)
T COG0089          69 IGLRKDYKKAYVTLKEGQSIDFFGGA   94 (94)
T ss_pred             CCCCCCCCEEEEECCCCCEEEECCCC
T ss_conf             66376342047982689687612369