HHsearch alignment for GI: 254780259 and conserved domain: PRK12280

Probab=100.00  E-value=3.6e-36  Score=229.46  Aligned_cols=93  Identities=39%  Similarity=0.540  Sum_probs=89.3

Q ss_pred             CHHHHHHHHCCCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCC
Q ss_conf             25786760032079988886489099998887898899999999968743378998518963331122466443223454
Q gi|254780259|r    4 IRFYDTIISPVIAEKSTLLAGQNQVVFNVKKDSSKSEIKSAVEALFSVKVVSVNTLIRKGKVKRLSRISAARSRVRSSRD   83 (110)
Q Consensus         4 ~~~~~vi~~P~~TEKs~~~~e~n~y~F~V~~~atK~eIK~ave~~f~V~V~~Vnt~~~~gK~Kr~~r~~g~k~~~~~~r~   83 (110)
T Consensus         1 M~~~~VIk~PviTEKs~~l~e~nkYtF~V~~~AnK~eIK~AVE~iF~VkV~kVNt~nv~~K~KR~Gr~~G~~--------   72 (160)
T PRK12280          1 MNLNEVIKYPILTEKSYQLMEKNVYTFKVDPKANKIEIKKAVEFIFNVKVEKVNIFNVDKKPKRLGRFKGFT--------   72 (160)
T ss_pred             CCHHHHHHCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCC--------
T ss_conf             987887451502586787887393899989989989999999998297688996243699871036335556--------


Q ss_pred             CCCCCCCCEEEEEECCCCCEECCCCC
Q ss_conf             44345881389999589973133248
Q gi|254780259|r   84 MYVSRKDVKRAFVTLAKGYSIDISAG  109 (110)
Q Consensus        84 ~~~k~~~~KKAiVtL~~G~~I~~~~g  109 (110)
T Consensus        73 -----~~~KKAiVtL~~G~~I~lf~e   93 (160)
T PRK12280         73 -----NKYKKAYVTLAEGYKINLFEE   93 (160)
T ss_pred             -----CCCEEEEEECCCCCEEEECCC
T ss_conf             -----876589998589997776877