HHsearch alignment of GI: 254780259 and MMDB domain: 2go5_4_
>2go5_4 (4:) Ribosomal protein L23; SR, SRP, ribosome, translation/RNA complex; 7.40A {Triticum SP} PDB: 2j37_4
Probab=99.92 E-value=2.7e-26 Score=172.28 Aligned_cols=87 Identities=25% Similarity=0.307 Sum_probs=79.3
Q ss_pred CCCCHHHHHHHHCCCCHHHHHHHH-CCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCCCCCC
Q ss_conf 985257867600320799888864-8909999888789889999999996874337899851896333112246644322
Q gi|254780259|r 1 MINIRFYDTIISPVIAEKSTLLAG-QNQVVFNVKKDSSKSEIKSAVEALFSVKVVSVNTLIRKGKVKRLSRISAARSRVR 79 (110)
Q Consensus 1 m~~~~~~~vi~~P~~TEKs~~~~e-~n~y~F~V~~~atK~eIK~ave~~f~V~V~~Vnt~~~~gK~Kr~~r~~g~k~~~~ 79 (110)
|+.|++|++|++|++||||+.+.| +|+|+|.||++|||+|||+|||++|+|+|.+|||+|.+++.+|.
T Consensus 64 ~~~ld~~~iIk~Pl~TEKa~~~~E~nnt~vF~Vd~kAnK~qIK~AVekly~VkV~kVNTl~~~~k~Kka----------- 132 (152)
T 2go5_4 64 RNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADKKKIKAAVKKMYDIQAKKVNTLIRPDGKKKA----------- 132 (152)
T ss_dssp -----CCCSEEEECCSHHHHHHHHHSCEEEEEECTTCCSHHHHHHHHHHHCCCEEEEEEECCSSSSEEE-----------
T ss_pred CCCCCHHHHHEECCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCEEE-----------
T ss_conf 455896561000643087899873075079982686886999999999809800378866748995789-----------
Q ss_pred CCCCCCCCCCCCEEEEEECCCCC
Q ss_conf 34544434588138999958997
Q gi|254780259|r 80 SSRDMYVSRKDVKRAFVTLAKGY 102 (110)
Q Consensus 80 ~~r~~~~k~~~~KKAiVtL~~G~ 102 (110)
..+.+++|++|+|+|+.|-
T Consensus 133 ----~v~l~~d~kk~~ValkiG~ 151 (152)
T 2go5_4 133 ----YVKLTPDYDALDVANKIGI 151 (152)
T ss_dssp ----EEEECTTTCSHHHHHTC--
T ss_pred ----EEECCCCCCHHHHHHHCCC
T ss_conf ----9984899828999850344