HHsearch alignment of GI: 254780259 and MMDB domain: 2go5_4_

>2go5_4 (4:) Ribosomal protein L23; SR, SRP, ribosome, translation/RNA complex; 7.40A {Triticum SP} PDB: 2j37_4
Probab=99.92  E-value=2.7e-26  Score=172.28  Aligned_cols=87  Identities=25%  Similarity=0.307  Sum_probs=79.3

Q ss_pred             CCCCHHHHHHHHCCCCHHHHHHHH-CCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCCCCCC
Q ss_conf             985257867600320799888864-8909999888789889999999996874337899851896333112246644322
Q gi|254780259|r    1 MINIRFYDTIISPVIAEKSTLLAG-QNQVVFNVKKDSSKSEIKSAVEALFSVKVVSVNTLIRKGKVKRLSRISAARSRVR   79 (110)
Q Consensus         1 m~~~~~~~vi~~P~~TEKs~~~~e-~n~y~F~V~~~atK~eIK~ave~~f~V~V~~Vnt~~~~gK~Kr~~r~~g~k~~~~   79 (110)
                      |+.|++|++|++|++||||+.+.| +|+|+|.||++|||+|||+|||++|+|+|.+|||+|.+++.+|.           
T Consensus        64 ~~~ld~~~iIk~Pl~TEKa~~~~E~nnt~vF~Vd~kAnK~qIK~AVekly~VkV~kVNTl~~~~k~Kka-----------  132 (152)
T 2go5_4           64 RNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADKKKIKAAVKKMYDIQAKKVNTLIRPDGKKKA-----------  132 (152)
T ss_dssp             -----CCCSEEEECCSHHHHHHHHHSCEEEEEECTTCCSHHHHHHHHHHHCCCEEEEEEECCSSSSEEE-----------
T ss_pred             CCCCCHHHHHEECCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCEEE-----------
T ss_conf             455896561000643087899873075079982686886999999999809800378866748995789-----------


Q ss_pred             CCCCCCCCCCCCEEEEEECCCCC
Q ss_conf             34544434588138999958997
Q gi|254780259|r   80 SSRDMYVSRKDVKRAFVTLAKGY  102 (110)
Q Consensus        80 ~~r~~~~k~~~~KKAiVtL~~G~  102 (110)
                          ..+.+++|++|+|+|+.|-
T Consensus       133 ----~v~l~~d~kk~~ValkiG~  151 (152)
T 2go5_4          133 ----YVKLTPDYDALDVANKIGI  151 (152)
T ss_dssp             ----EEEECTTTCSHHHHHTC--
T ss_pred             ----EEECCCCCCHHHHHHHCCC
T ss_conf             ----9984899828999850344