HHsearch alignment of GI: 254780259 and MMDB domain: 2zjr_Q_

>2zjr_Q (Q:) 50S ribosomal protein L23; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans}
Probab=100.00  E-value=1.3e-34  Score=220.24  Aligned_cols=93  Identities=38%  Similarity=0.553  Sum_probs=88.5

Q ss_pred             CHHHHHHHHCCCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCC
Q ss_conf             25786760032079988886489099998887898899999999968743378998518963331122466443223454
Q gi|254780259|r    4 IRFYDTIISPVIAEKSTLLAGQNQVVFNVKKDSSKSEIKSAVEALFSVKVVSVNTLIRKGKVKRLSRISAARSRVRSSRD   83 (110)
Q Consensus         4 ~~~~~vi~~P~~TEKs~~~~e~n~y~F~V~~~atK~eIK~ave~~f~V~V~~Vnt~~~~gK~Kr~~r~~g~k~~~~~~r~   83 (110)
                      |++||+|++|++||||+.+.|+|+|+|.|+++|||+|||+|||.+|+|+|.+|||+|++||.||++++.           
T Consensus         1 m~~~~vI~~p~iTEKs~~l~e~n~~~F~V~~~anK~eIK~ave~~f~VkV~~VnT~~~~gK~kR~~~~~-----------   69 (95)
T 2zjr_Q            1 MSHYDILQAPVISEKAYSAMERGVYSFWVSPKATKTEIKDAIQQAFGVRVIGISTMNVPGKRKRVGRFI-----------   69 (95)
T ss_dssp             -CCSSSCCEECCTHHHHHHHTTTCCEEEECSSCTHHHHHHHHHHHHCCCCSEEEECCBCCCCCSSSSCC-----------
T ss_pred             CCCCCEEEECCCCHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEEEECCCEEEECCCC-----------
T ss_conf             970018750410887887776997999981888989999999998399637998898279615768844-----------


Q ss_pred             CCCCCCCCEEEEEECCCCCEECCCCC
Q ss_conf             44345881389999589973133248
Q gi|254780259|r   84 MYVSRKDVKRAFVTLAKGYSIDISAG  109 (110)
Q Consensus        84 ~~~k~~~~KKAiVtL~~G~~I~~~~g  109 (110)
                        |++++||||||||++|++||||+|
T Consensus        70 --g~~~~~KKA~VtL~~g~~i~~~~~   93 (95)
T 2zjr_Q           70 --GQRNDRKKAIVRLAEGQSIEALAG   93 (95)
T ss_dssp             --CCCCCBEEEEEECCSSCCCSSTTT
T ss_pred             --CCCCCCEEEEEECCCCCEECCCCC
T ss_conf             --013897999999589796401378