HHsearch alignment of GI: 254780259 and MMDB domain: 2zjr_Q_
>2zjr_Q (Q:) 50S ribosomal protein L23; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans}
Probab=100.00 E-value=1.3e-34 Score=220.24 Aligned_cols=93 Identities=38% Similarity=0.553 Sum_probs=88.5
Q ss_pred CHHHHHHHHCCCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCC
Q ss_conf 25786760032079988886489099998887898899999999968743378998518963331122466443223454
Q gi|254780259|r 4 IRFYDTIISPVIAEKSTLLAGQNQVVFNVKKDSSKSEIKSAVEALFSVKVVSVNTLIRKGKVKRLSRISAARSRVRSSRD 83 (110)
Q Consensus 4 ~~~~~vi~~P~~TEKs~~~~e~n~y~F~V~~~atK~eIK~ave~~f~V~V~~Vnt~~~~gK~Kr~~r~~g~k~~~~~~r~ 83 (110)
|++||+|++|++||||+.+.|+|+|+|.|+++|||+|||+|||.+|+|+|.+|||+|++||.||++++.
T Consensus 1 m~~~~vI~~p~iTEKs~~l~e~n~~~F~V~~~anK~eIK~ave~~f~VkV~~VnT~~~~gK~kR~~~~~----------- 69 (95)
T 2zjr_Q 1 MSHYDILQAPVISEKAYSAMERGVYSFWVSPKATKTEIKDAIQQAFGVRVIGISTMNVPGKRKRVGRFI----------- 69 (95)
T ss_dssp -CCSSSCCEECCTHHHHHHHTTTCCEEEECSSCTHHHHHHHHHHHHCCCCSEEEECCBCCCCCSSSSCC-----------
T ss_pred CCCCCEEEECCCCHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEEEECCCEEEECCCC-----------
T ss_conf 970018750410887887776997999981888989999999998399637998898279615768844-----------
Q ss_pred CCCCCCCCEEEEEECCCCCEECCCCC
Q ss_conf 44345881389999589973133248
Q gi|254780259|r 84 MYVSRKDVKRAFVTLAKGYSIDISAG 109 (110)
Q Consensus 84 ~~~k~~~~KKAiVtL~~G~~I~~~~g 109 (110)
|++++||||||||++|++||||+|
T Consensus 70 --g~~~~~KKA~VtL~~g~~i~~~~~ 93 (95)
T 2zjr_Q 70 --GQRNDRKKAIVRLAEGQSIEALAG 93 (95)
T ss_dssp --CCCCCBEEEEEECCSSCCCSSTTT
T ss_pred --CCCCCCEEEEEECCCCCEECCCCC
T ss_conf --013897999999589796401378