HHsearch results for GI: 254780259 and protein with PDBid: 2zjr_Q
>2zjr_Q 50S ribosomal protein L23; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: d.12.1.1 PDB: 1sm1_R* 2aar_R 2d3o_R 2zjp_Q* 2zjq_Q 1nkw_R 3cf5_Q* 3dll_Q* 1nwy_R* 1nwx_R* 1xbp_R* 1pnu_R 1pny_R 1vor_U 1vou_U 1vow_U 1voy_U 1vp0_U
Probab=100.00 E-value=6.7e-36 Score=226.69 Aligned_cols=93 Identities=38% Similarity=0.557 Sum_probs=87.9
Q ss_pred CHHHHHHHHCCCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCC
Q ss_conf 25786760032079988886489099998887898899999999968743378998518963331122466443223454
Q gi|254780259|r 4 IRFYDTIISPVIAEKSTLLAGQNQVVFNVKKDSSKSEIKSAVEALFSVKVVSVNTLIRKGKVKRLSRISAARSRVRSSRD 83 (110)
Q Consensus 4 ~~~~~vi~~P~~TEKs~~~~e~n~y~F~V~~~atK~eIK~ave~~f~V~V~~Vnt~~~~gK~Kr~~r~~g~k~~~~~~r~ 83 (110)
|++||+|++|++||||+.+.|+|+|+|.|+++|||.|||+|||++|+|+|.+|||+|.+||.||++++
T Consensus 1 m~~ydvi~~P~vTEKs~~~~e~n~y~F~V~~~a~K~eIK~ave~~f~VkV~~Vnt~~~~gK~kr~~~~------------ 68 (95)
T 2zjr_Q 1 MSHYDILQAPVISEKAYSAMERGVYSFWVSPKATKTEIKDAIQQAFGVRVIGISTMNVPGKRKRVGRF------------ 68 (95)
T ss_dssp -CCSSSCCEECCTHHHHHHHTTTCCEEEECSSCTHHHHHHHHHHHHCCCCSEEEECCBCCCCCSSSSC------------
T ss_pred CCCCCEEEECCCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCEEEECCC------------
T ss_conf 98434886040288787667699899997798999999999999839964899889847953677883------------
Q ss_pred CCCCCCCCEEEEEECCCCCEECCCCC
Q ss_conf 44345881389999589973133248
Q gi|254780259|r 84 MYVSRKDVKRAFVTLAKGYSIDISAG 109 (110)
Q Consensus 84 ~~~k~~~~KKAiVtL~~G~~I~~~~g 109 (110)
.|++++||||||||++|++||||+|
T Consensus 69 -~g~~~~~KKAiVtL~~g~~I~~~~g 93 (95)
T 2zjr_Q 69 -IGQRNDRKKAIVRLAEGQSIEALAG 93 (95)
T ss_dssp -CCCCCCBEEEEEECCSSCCCSSTTT
T ss_pred -CCCCCCCEEEEEECCCCCEEEECCC
T ss_conf -4134898999999789696300267