HHsearch results for GI: 254780259 and protein with PDBid: 3ofq_T
>3ofq_T 50S ribosomal protein L23; protein biosynthesis, ribosomes, RNA, tRNA, transfer, antibi EXIT, peptidyl, ribosomal subunit, large; 3.10A {Escherichia coli} PDB: 3fik_T 2wwq_T 3ofr_T* 2j28_T 3e1b_M 3e1d_M 3iy9_T 3i1n_T 1p85_R 1p86_R 1vs8_T 1vs6_T 2aw4_T 2awb_T 1vt2_T 2i2v_T 2i2t_T* 2qao_T* 2qba_T* 2qbc_T* ...
Probab=99.96 E-value=2.3e-32 Score=206.31 Aligned_cols=91 Identities=41% Similarity=0.589 Sum_probs=83.9
Q ss_pred CCCCHHHHHHHHCCCCHHHHHHHH-CCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCCCCCC
Q ss_conf 985257867600320799888864-8909999888789889999999996874337899851896333112246644322
Q gi|254780259|r 1 MINIRFYDTIISPVIAEKSTLLAG-QNQVVFNVKKDSSKSEIKSAVEALFSVKVVSVNTLIRKGKVKRLSRISAARSRVR 79 (110)
Q Consensus 1 m~~~~~~~vi~~P~~TEKs~~~~e-~n~y~F~V~~~atK~eIK~ave~~f~V~V~~Vnt~~~~gK~Kr~~r~~g~k~~~~ 79 (110)
|+++++||+|++|++||||+.+.| .|+|+|.|+++|||+|||+|||++|+|+|.+|||+|.+||.+|+++.
T Consensus 2 ~~~~~~~~vi~~PvvTEKs~~~~e~~n~ytF~V~~~a~K~eIK~ave~~f~VkV~~Vnt~~~~gK~kr~~~~-------- 73 (93)
T 3ofq_T 2 IREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKRHGQR-------- 73 (93)
T ss_dssp CSCTTTTCCCCCCCCCSTTTSHHHHHSCCCCCCTTTCCSTTTTGGGTSSSSSCCSCCCCEEECCCEECSSSS--------
T ss_pred CCHHHHHHHHHCCCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCC--------
T ss_conf 766789977731536888898786488899998898999999999999809976589888737953674783--------
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCEE
Q ss_conf 3454443458813899995899731
Q gi|254780259|r 80 SSRDMYVSRKDVKRAFVTLAKGYSI 104 (110)
Q Consensus 80 ~~r~~~~k~~~~KKAiVtL~~G~~I 104 (110)
.|++++||||||||++|++|
T Consensus 74 -----~g~~~~~KKAiVtL~~g~~I 93 (93)
T 3ofq_T 74 -----IGRRSDWKKAYVTLKEGQNL 93 (93)
T ss_dssp -----CEECCCEEECCCCCCSSCCC
T ss_pred -----CCCCCCCEEEEEECCCCCCC
T ss_conf -----42458978999994896989