HHsearch results for GI: 254780259 and protein with PDBid: 3ofq_T

>3ofq_T 50S ribosomal protein L23; protein biosynthesis, ribosomes, RNA, tRNA, transfer, antibi EXIT, peptidyl, ribosomal subunit, large; 3.10A {Escherichia coli} PDB: 3fik_T 2wwq_T 3ofr_T* 2j28_T 3e1b_M 3e1d_M 3iy9_T 3i1n_T 1p85_R 1p86_R 1vs8_T 1vs6_T 2aw4_T 2awb_T 1vt2_T 2i2v_T 2i2t_T* 2qao_T* 2qba_T* 2qbc_T* ...
Probab=99.96  E-value=2.3e-32  Score=206.31  Aligned_cols=91  Identities=41%  Similarity=0.589  Sum_probs=83.9

Q ss_pred             CCCCHHHHHHHHCCCCHHHHHHHH-CCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCCCCCC
Q ss_conf             985257867600320799888864-8909999888789889999999996874337899851896333112246644322
Q gi|254780259|r    1 MINIRFYDTIISPVIAEKSTLLAG-QNQVVFNVKKDSSKSEIKSAVEALFSVKVVSVNTLIRKGKVKRLSRISAARSRVR   79 (110)
Q Consensus         1 m~~~~~~~vi~~P~~TEKs~~~~e-~n~y~F~V~~~atK~eIK~ave~~f~V~V~~Vnt~~~~gK~Kr~~r~~g~k~~~~   79 (110)
                      |+++++||+|++|++||||+.+.| .|+|+|.|+++|||+|||+|||++|+|+|.+|||+|.+||.+|+++.        
T Consensus         2 ~~~~~~~~vi~~PvvTEKs~~~~e~~n~ytF~V~~~a~K~eIK~ave~~f~VkV~~Vnt~~~~gK~kr~~~~--------   73 (93)
T 3ofq_T            2 IREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKRHGQR--------   73 (93)
T ss_dssp             CSCTTTTCCCCCCCCCSTTTSHHHHHSCCCCCCTTTCCSTTTTGGGTSSSSSCCSCCCCEEECCCEECSSSS--------
T ss_pred             CCHHHHHHHHHCCCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCC--------
T ss_conf             766789977731536888898786488899998898999999999999809976589888737953674783--------


Q ss_pred             CCCCCCCCCCCCEEEEEECCCCCEE
Q ss_conf             3454443458813899995899731
Q gi|254780259|r   80 SSRDMYVSRKDVKRAFVTLAKGYSI  104 (110)
Q Consensus        80 ~~r~~~~k~~~~KKAiVtL~~G~~I  104 (110)
                           .|++++||||||||++|++|
T Consensus        74 -----~g~~~~~KKAiVtL~~g~~I   93 (93)
T 3ofq_T           74 -----IGRRSDWKKAYVTLKEGQNL   93 (93)
T ss_dssp             -----CEECCCEEECCCCCCSSCCC
T ss_pred             -----CCCCCCCEEEEEECCCCCCC
T ss_conf             -----42458978999994896989