PSIBLAST alignment of GI: 254780260 and protein with PDB id: 1ffk
>gi|10120922|pdb|1FFK|C Chain C, Crystal Structure Of The Large Ribosomal Subunit From Haloarcula Marismortui At 2.4 Angstrom Resolution Length = 246
>gi|14278036|pdb|1GIY|F Chain F, Crystal Structure Of The Ribosome At 5.5 A Resolution. This File, 1giy, Contains The 50s Ribosome Subunit. The 30s Ribosome Subunit, Three Trna, And Mrna Molecules Are In The File 1gix Length = 246
Score = 91.3 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 40/251 (15%), Positives = 83/251 (33%), Gaps = 52/251 (20%)
Query: 2 IELSVRNLDGEDKGVISVSEDIFALKPQQGILARVLRWQSWRKRIG-----CSKSKGRSE 56
+E ++ +LDG G + + + +F + ++ + +R ++ + + +E
Sbjct: 1 MEATIYDLDGNTDGEVDLPD-VFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAE 59
Query: 57 VAYTGSKMYVQKGTGRARHSSKSVSQFRGGGKAFGPVPIIGVH-ALPKKVRSLALRHALS 115
+G Q + ++ V Q G A P L K R LA+R AL+
Sbjct: 60 SFGSGRG---QAHVPKLDGRARRVPQAVKGRSAHPPKTEKDRSLDLNDKERQLAVRSALA 116
Query: 116 DKFCSNDI-------------MVIDNLVSKECKTKYLVTRF------------------- 143
++ + +V+ + KT+ +V+
Sbjct: 117 ATADADLVADRGHEFDRDEVPVVVSDDFEDLVKTQEVVSLLEALDVHADIDRADETKIKA 176
Query: 144 -----RALDLSNALIIDGCQLDRNFQLAARNIPNINLLPVQGINVYDILRCSK----LVL 194
R I D AARN+ ++ +N D+ V
Sbjct: 177 GQGSARGRKYRRPASILFVTSDEPST-AARNLAGADVATASEVNTEDLAPGGAPGRLTVF 235
Query: 195 SKSAIEALEDR 205
++SA+ + +R
Sbjct: 236 TESALAEVAER 246