PSIBLAST alignment of GI: 254780260 and protein with PDB id: 1jzx
gi|16975049|pdb|1JZX|K Chain K, Structural Basis For The Interaction Of Antibiotics With The Peptidyl Transferase Center In Eubacteria Length = 205
>gi|16975053|pdb|1JZY|K Chain K, Structural Basis For The Interaction Of Antibiotics With The Peptidyl Transferase Center In Eubacteria Length = 205
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 68/199 (34%), Positives = 109/199 (54%), Gaps = 6/199 (3%)
Query: 1 MIELSVRNLDGEDKGVISVSEDIFALKPQQGILARVLRWQSWRKRIGCSKSKGRSEVAYT 60
M +++V +G + + + G+L V+ WQ +R G + ++ R++V+ T
Sbjct: 1 MAQINVIGQNGGRTIELPLP------EVNSGVLHEVVTWQLASRRRGTASTRTRAQVSKT 54
Query: 61 GSKMYVQKGTGRARHSSKSVSQFRGGGKAFGPVPIIGVHALPKKVRSLALRHALSDKFCS 120
G KMY QKGTG ARH +SV F GGG AFGP P + LP++VR L L A++ +
Sbjct: 55 GRKMYGQKGTGNARHGDRSVPTFVGGGVAFGPKPRSYDYTLPRQVRQLGLAMAIASRQEG 114
Query: 121 NDIMVIDNLVSKECKTKYLVTRFRALDLSNALIIDGCQLDRNFQLAARNIPNINLLPVQG 180
++ +D + KTK ++ + L + D N + AARN+ +++LPV G
Sbjct: 115 GKLVAVDGFDIADAKTKNFISWAKQNGLDGTEKVLLVTDDENTRRAARNVSWVSVLPVAG 174
Query: 181 INVYDILRCSKLVLSKSAI 199
+NVYDILR +LV+ +A+
Sbjct: 175 VNVYDILRHDRLVIDAAAL 193