PSIBLAST alignment of GI: 254780260 and protein with PDB id: 1p85
gi|33357904|pdb|1P85|C Chain C, Real Space Refined Coordinates Of The 50s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp State Of E. Coli 70s Ribosome Length = 201
>gi|33357932|pdb|1P86|C Chain C, Real Space Refined Coordinates Of The 50s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Initiation-Like State Of E. Coli 70s Ribosome Length = 201
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 59/205 (28%), Positives = 104/205 (50%), Gaps = 5/205 (2%)
Query: 2 IELSVRNLDGEDKGVISVSEDIFALKPQQGILARVLRWQSWRKRIGCSKSKGRSEVAYTG 61
+EL +++ ++VSE F + ++ +V+ + R G K R+EV +G
Sbjct: 1 MELVLKDAQ----SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56
Query: 62 SKMYVQKGTGRARHSSKSVSQFRGGGKAFGPVPIIGVHALPKKVRSLALRHALSDKFCSN 121
K + QKGTGRAR S +R GG F P + KK+ AL+ LS+ +
Sbjct: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116
Query: 122 DIMVIDNLVSKECKTKYLVTRFRALDLSNALIIDGCQLDRNFQLAARNIPNINLLPVQGI 181
++V++ + KTK L + + + L + LII G +LD N LAARN+ +++ GI
Sbjct: 117 RLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITG-ELDENLFLAARNLHKVDVRDATGI 175
Query: 182 NVYDILRCSKLVLSKSAIEALEDRF 206
+ ++ K+V++ A++ +E+
Sbjct: 176 DPVSLIAFDKVVMTADAVKQVEEML 200