PSIBLAST alignment of GI: 254780260 and protein with PDB id: 1s1i
>gi|49258842|pdb|1S1I|D Chain D, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obtained By Docking Atomic Models For Rna And Protein Components Into A 11.7 A Cryo-Em Map. This File, 1s1i, Contains 60s Subunit. The 40s Ribosomal Subunit Is In File 1s1h Length = 361
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/260 (13%), Positives = 74/260 (28%), Gaps = 56/260 (21%)
Query: 2 IELSVRNLDGEDKGVISVSEDIFALKPQQGILARVLRWQSWRKRIGC-----SKSKGRSE 56
+++V +L GE +F+ + I+ V + KR + + +E
Sbjct: 3 PQVTVHSLTGEATANALPLPAVFSAPIRPDIVHTVFTSVNKNKRQAYAVSEKAGHQTSAE 62
Query: 57 VAYTGS---KMYVQKGTGRARHSSKSVSQFRGGGKAFGPVP--IIGVHALPKKVRSLALR 111
TG ++ G G R + GG+ F P + + A
Sbjct: 63 SWGTGRAVARIPRVGGGGTGRSGQGAFGNMCRGGRMFAPTKTWRKWNVKVNHNEKRYATA 122
Query: 112 H----------ALSDKFCSNDI----MVIDNLVSKECKTKYLVTRFR------------- 144
L+ I +V+ + KTK V +
Sbjct: 123 SAIAATAVASLVLARGHRVEKIPEIPLVVSTDLESIQKTKEAVAALKAVGAHSDLLKVLK 182
Query: 145 --------------ALDLSNALIIDGCQLDRNFQLAARNIPNINLLPVQGINVYDILR-- 188
++ + D A RN+P + V +N+ +
Sbjct: 183 SKKLRAGKGKYRNRRWTQRRGPLVVYAE-DNGIVKALRNVPGVETANVASLNLLQLAPGA 241
Query: 189 --CSKLVLSKSAIEALEDRF 206
++ +++A L+ +
Sbjct: 242 HLGRFVIWTEAAFTKLDQVW 261