PSIBLAST alignment of GI: 254780260 and protein with PDB id: 3jyw
>gi|281500834|pdb|3JYW|D Chain D, Structure Of The 60s Proteins For Eukaryotic Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 257
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/258 (13%), Positives = 73/258 (28%), Gaps = 56/258 (21%)
Query: 3 ELSVRNLDGEDKGVISVSEDIFALKPQQGILARVLRWQSWRKRIGC-----SKSKGRSEV 57
+++V +L GE +F+ + I+ V + KR + + +E
Sbjct: 1 QVTVHSLTGEATANALPLPAVFSAPIRPDIVHTVFTSVNKNKRQAYAVSEKAGHQTSAES 60
Query: 58 AYTGS---KMYVQKGTGRARHSSKSVSQFRGGGKAFGPVP--IIGVHALPKKVRSLALRH 112
TG ++ G G R + GG+ F P + + A
Sbjct: 61 WGTGRAVARIPRVGGGGTGRSGQGAFGNMCRGGRMFAPTKTWRKWNVKVNHNEKRYATAS 120
Query: 113 ----------ALSDKFCSNDI----MVIDNLVSKECKTKYLVTRFR-------------- 144
L+ I +V+ + KTK V +
Sbjct: 121 AIAATAVASLVLARGHRVEKIPEIPLVVSTDLESIQKTKEAVAALKAVGAHSDLLKVLKS 180
Query: 145 -------------ALDLSNALIIDGCQLDRNFQLAARNIPNINLLPVQGINVYDILR--- 188
++ + D A RN+P + V +N+ +
Sbjct: 181 KKLRAGKGKYRNRRWTQRRGPLVVYAE-DNGIVKALRNVPGVETANVASLNLLQLAPGAH 239
Query: 189 -CSKLVLSKSAIEALEDR 205
++ +++A L+
Sbjct: 240 LGRFVIWTEAAFTKLDQV 257