PSIBLAST alignment of GI: 254780260 and protein with PDB id: 3pyo
>gi|322812576|pdb|3PYO|E Chain E, Crystal Structure Of A Complex Containing Domain 3 From The Psiv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 50s Subunit Of The First 70s Ribosome. Length = 202
>gi|322812629|pdb|3PYR|E Chain E, Crystal Structure Of A Complex Containing Domain 3 From The Psiv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 50s Subunit Of The Second 70s Ribosome. Length = 202
Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 5/205 (2%)
Query: 1 MIELSVRNLDGEDKGVISVSEDIFALKPQQGILARVLRWQSWRKRIGCSKSKGRSEVAYT 60
M ++ V + G + + + +L V+RWQ ++R G + +K R EVAY+
Sbjct: 1 MYQIPVLSPSGRRELAADLP-----AEINPHLLWEVVRWQLAKRRRGTASTKTRGEVAYS 55
Query: 61 GSKMYVQKGTGRARHSSKSVSQFRGGGKAFGPVPIIGVHALPKKVRSLALRHALSDKFCS 120
G K++ QK TGRARH F GGG FGP P + LPKKVR L A++D+
Sbjct: 56 GRKIWPQKHTGRARHGDIGAPIFVGGGVVFGPKPRDYSYTLPKKVRKKGLAMAVADRARE 115
Query: 121 NDIMVIDNLVSKECKTKYLVTRFRALDLSNALIIDGCQLDRNFQLAARNIPNINLLPVQG 180
+++++ KTK + + L + + + + AARN+P + L +G
Sbjct: 116 GKLLLVEAFAGVNGKTKEFLAWAKEAGLDGSESVLLVTGNELVRRAARNLPWVVTLAPEG 175
Query: 181 INVYDILRCSKLVLSKSAIEALEDR 205
+NVYDI+R +LV+ A E ++R
Sbjct: 176 LNVYDIVRTERLVMDLDAWEVFQNR 200