RPSBLAST alignment for GI: 254780260 and conserved domain: COG0088

>gnl|CDD|30437 COG0088, RplD, Ribosomal protein L4 [Translation, ribosomal structure and biogenesis]. Length = 214

 Score =  176 bits (449), Expect = 3e-45
 Identities = 80/211 (37%), Positives = 116/211 (54%), Gaps = 4/211 (1%)

Query: 1   MIELSVRNLDGEDKGVISVSEDIFALKPQQGILARVLRWQSWRKRIGCSKSKGRSEVAYT 60
           M++L V +LDGE+ G + +  ++F  +  + ++ R +  Q   +R G   +K R EV+  
Sbjct: 1   MMKLKVYDLDGEEVGEVELLPEVFGPERNEDLIHRAVLAQLANRRQGTHSTKTRGEVSGG 60

Query: 61  GSKMYVQKGTGRARHSSKSVSQFRGGGKAFGPVPIIGVH-ALPKKVRSLALRHALSDKFC 119
           G K + QKGTGRAR  S    Q+RGGG A GP P       L KK R LALR ALS K  
Sbjct: 61  GKKPWGQKGTGRARQGSIRSPQWRGGGVAHGPKPERDYSQKLNKKERRLALRSALSAKAR 120

Query: 120 SNDIMVIDNL-VSKECKTKYLVTRFRALDLSN-ALIIDGCQLDRNFQLAARNIPNIN-LL 176
           +  ++V+         KTK LV   + L L    L+I   + D N +L+ARN+ N+  +L
Sbjct: 121 AGKLVVVRGHVFEDAPKTKELVEFLKKLGLDVKRLLIVKGERDGNGKLSARNLKNVKVVL 180

Query: 177 PVQGINVYDILRCSKLVLSKSAIEALEDRFK 207
            V G+ V D+LR  KLV++K A   +E+R  
Sbjct: 181 VVGGLPVVDVLRADKLVITKLAPGKIEERLT 211