RPSBLAST alignment of GI: 254780260 and protein with PDBid: 1vq8

>1vq8_C 50S ribosomal protein L4E; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: c.22.1.1 PDB: 1k73_E* 1k8a_E* 1k9m_E* 1kc8_E* 1kd1_E* 1kqs_C* 1m1k_E* 1m90_E* 1n8r_E* 1nji_E* 1q7y_E* 1q81_E* 1q82_E* 1q86_E* 1qvf_C 1qvg_C 1s72_C* 1vq4_C* 1vq5_C* 1vq6_C* ... Length = 246

 Score =  130 bits (327), Expect = 2e-31
 Identities = 39/246 (15%), Positives = 79/246 (32%), Gaps = 44/246 (17%)

Query: 3   ELSVRNLDGEDKGVISVSEDIFALKPQQGILARVLRWQSWRKRIGCSKSKGRSEVAYTGS 62
           + ++ +LDG   G + +  D+F    +  ++ + +R     ++      +         S
Sbjct: 2   QATIYDLDGNTDGEVDLP-DVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAES 60

Query: 63  --KMYVQKGTGRARHSSKSVSQFRGGGKAFGP-VPIIGVHALPKKVRSLALRHALSDKFC 119
                 Q    +    ++ V Q   G  A  P         L  K R LA+R AL+    
Sbjct: 61  FGSGRGQAHVPKLDGRARRVPQAVKGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATAD 120

Query: 120 SNDIM-------------VIDNLVSKECKTKYLVTRFRALDLSNALIIDG---------- 156
           ++ +              V+ +      KT+ +V+   ALD+   +              
Sbjct: 121 ADLVADRGHEFDRDEVPVVVSDDFEDLVKTQEVVSLLEALDVHADIDRADETKIKAGQGS 180

Query: 157 -------------CQLDRNFQLAARNIPNINLLPVQGINVYDILRCSKL----VLSKSAI 199
                                 AARN+   ++     +N  D+          V ++SA+
Sbjct: 181 ARGRKYRRPASILFVTSDEPSTAARNLAGADVATASEVNTEDLAPGGAPGRLTVFTESAL 240

Query: 200 EALEDR 205
             + +R
Sbjct: 241 AEVAER 246