RPSBLAST alignment of GI: 254780260 and SCOP domain: d1vqoc1

Alignment
>d1vqoc1 c.22.1.1 (C:1-246) Ribosomal protein L4 {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 246
 Score =  130 bits (327), Expect = 1e-31
 Identities = 39/246 (15%), Positives = 79/246 (32%), Gaps = 44/246 (17%)

Query: 3   ELSVRNLDGEDKGVISVSEDIFALKPQQGILARVLRWQSWRKRIGCSKSKGRSEVAYTGS 62
           + ++ +LDG   G + +  D+F    +  ++ + +R     ++      +         S
Sbjct: 2   QATIYDLDGNTDGEVDLP-DVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAES 60

Query: 63  --KMYVQKGTGRARHSSKSVSQFRGGGKAFGP-VPIIGVHALPKKVRSLALRHALSDKFC 119
                 Q    +    ++ V Q   G  A  P         L  K R LA+R AL+    
Sbjct: 61  FGSGRGQAHVPKLDGRARRVPQAVKGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATAD 120

Query: 120 SNDIM-------------VIDNLVSKECKTKYLVTRFRALDLSNALIIDG---------- 156
           ++ +              V+ +      KT+ +V+   ALD+   +              
Sbjct: 121 ADLVADRGHEFDRDEVPVVVSDDFEDLVKTQEVVSLLEALDVHADIDRADETKIKAGQGS 180

Query: 157 -------------CQLDRNFQLAARNIPNINLLPVQGINVYDILRCSKL----VLSKSAI 199
                                 AARN+   ++     +N  D+          V ++SA+
Sbjct: 181 ARGRKYRRPASILFVTSDEPSTAARNLAGADVATASEVNTEDLAPGGAPGRLTVFTESAL 240

Query: 200 EALEDR 205
             + +R
Sbjct: 241 AEVAER 246

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribosomal protein L4
superfamily: Ribosomal protein L4
family: Ribosomal protein L4
domain: Ribosomal protein L4
species: Archaeon Haloarcula marismortui [TaxId: 2238]