HHsearch alignment for GI: 254780261 and conserved domain: PRK00001

>PRK00001 rplC 50S ribosomal protein L3; Validated.
Probab=100.00  E-value=0  Score=608.98  Aligned_cols=211  Identities=52%  Similarity=0.815  Sum_probs=206.0

Q ss_pred             CCCCEEEEECCCCEEECCCCCEEEEEEEEECCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCEE
Q ss_conf             94426899658451698898792268999179789999706778861256405555643157101125764035634103
Q gi|254780261|r    1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKL   80 (221)
Q Consensus         1 mr~Glig~KiGMT~if~e~G~~vpVTViev~~~~Vv~~kt~ekdGY~Avqvg~~~~k~k~~~Kp~~G~fkK~g~~pk~~l   80 (221)
T Consensus         1 M~~Glig~KiGMT~i~~~~G~~vpVTVl~v~p~~V~~~kt~ekdGY~avqlg~~~~k~~~~~Kp~~g~~~K~~~~p~~~l   80 (212)
T PRK00001          1 MMKGILGKKVGMTQIFTEDGESIPVTVIEAGPNVVTQVKTVEKDGYNAVQLGFGDKKEKRVNKPEAGHFAKAGVEPKRKL   80 (212)
T ss_pred             CCCCEEEEECCCEEEECCCCCEEEEEEEEECCCEEEEEEEECCCCEEEEEEECEECCCCCCCHHHCCHHHHHCCCCCCEE
T ss_conf             96514599637718888999599879999689799999950579806899711013532258545013566154646228


Q ss_pred             EEEECCCCHHHHHCCCCEEEEEECCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf             65320651121100341000123025326578987534336405750442123335774543466655555675224226
Q gi|254780261|r   81 FEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN  160 (221)
Q Consensus        81 ~Efrv~~~~~~~~vG~~i~~~~F~~Gq~VDV~g~SkGKGFqGviKR~gf~g~~~sHG~sk~hR~~GsiG~~~~PgRV~kG  160 (221)
T Consensus        81 ~Efrv~~~-~~~~~G~~i~~~~F~~Gq~VDV~g~SkGKGFqGvmKRh~F~g~~~sHG~s~~hR~~GSiG~~~~PgRV~kG  159 (212)
T PRK00001         81 KEFRVDEL-AEYEVGDEITVDIFEAGQKVDVTGTSKGKGFAGVMKRHNFSGGPASHGSSRSHRRPGSIGQRQTPGRVFKG  159 (212)
T ss_pred             EEEEECCH-HHCCCCCEECHHHCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             99971561-20347872378885799768888877077542027750247887635688656178866667788867568


Q ss_pred             CCCCCCCCCEEEEECCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCC
Q ss_conf             76665237733365165899980768989997157458887099996031467
Q gi|254780261|r  161 KKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA  213 (221)
Q Consensus       161 kkm~G~mG~~~~T~~nl~i~~id~e~n~i~vkGsVPG~~~~~~v~ir~a~k~~  213 (221)
T Consensus       160 kkMaG~mG~~~~T~~Nl~V~~id~e~nli~vkGsVPG~-~~~~V~ir~aik~~  211 (212)
T PRK00001        160 KKMAGHMGNERVTVQNLEVVKVDAERNLLLVKGAVPGA-KGSLVIIKPAVKAG  211 (212)
T ss_pred             CCCCCCCCCEEEEECCCEEEEEECCCCEEEEEECCCCC-CCCEEEEEECEECC
T ss_conf             98798648716887487999996888989998468789-99899996140058