HHsearch alignment for GI: 254780261 and conserved domain: PRK00001
>PRK00001 rplC 50S ribosomal protein L3; Validated.
Probab=100.00 E-value=0 Score=608.98 Aligned_cols=211 Identities=52% Similarity=0.815 Sum_probs=206.0
Q ss_pred CCCCEEEEECCCCEEECCCCCEEEEEEEEECCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCEE
Q ss_conf 94426899658451698898792268999179789999706778861256405555643157101125764035634103
Q gi|254780261|r 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKL 80 (221)
Q Consensus 1 mr~Glig~KiGMT~if~e~G~~vpVTViev~~~~Vv~~kt~ekdGY~Avqvg~~~~k~k~~~Kp~~G~fkK~g~~pk~~l 80 (221)
T Consensus 1 M~~Glig~KiGMT~i~~~~G~~vpVTVl~v~p~~V~~~kt~ekdGY~avqlg~~~~k~~~~~Kp~~g~~~K~~~~p~~~l 80 (212)
T PRK00001 1 MMKGILGKKVGMTQIFTEDGESIPVTVIEAGPNVVTQVKTVEKDGYNAVQLGFGDKKEKRVNKPEAGHFAKAGVEPKRKL 80 (212)
T ss_pred CCCCEEEEECCCEEEECCCCCEEEEEEEEECCCEEEEEEEECCCCEEEEEEECEECCCCCCCHHHCCHHHHHCCCCCCEE
T ss_conf 96514599637718888999599879999689799999950579806899711013532258545013566154646228
Q ss_pred EEEECCCCHHHHHCCCCEEEEEECCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 65320651121100341000123025326578987534336405750442123335774543466655555675224226
Q gi|254780261|r 81 FEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 (221)
Q Consensus 81 ~Efrv~~~~~~~~vG~~i~~~~F~~Gq~VDV~g~SkGKGFqGviKR~gf~g~~~sHG~sk~hR~~GsiG~~~~PgRV~kG 160 (221)
T Consensus 81 ~Efrv~~~-~~~~~G~~i~~~~F~~Gq~VDV~g~SkGKGFqGvmKRh~F~g~~~sHG~s~~hR~~GSiG~~~~PgRV~kG 159 (212)
T PRK00001 81 KEFRVDEL-AEYEVGDEITVDIFEAGQKVDVTGTSKGKGFAGVMKRHNFSGGPASHGSSRSHRRPGSIGQRQTPGRVFKG 159 (212)
T ss_pred EEEEECCH-HHCCCCCEECHHHCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99971561-20347872378885799768888877077542027750247887635688656178866667788867568
Q ss_pred CCCCCCCCCEEEEECCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCC
Q ss_conf 76665237733365165899980768989997157458887099996031467
Q gi|254780261|r 161 KKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 (221)
Q Consensus 161 kkm~G~mG~~~~T~~nl~i~~id~e~n~i~vkGsVPG~~~~~~v~ir~a~k~~ 213 (221)
T Consensus 160 kkMaG~mG~~~~T~~Nl~V~~id~e~nli~vkGsVPG~-~~~~V~ir~aik~~ 211 (212)
T PRK00001 160 KKMAGHMGNERVTVQNLEVVKVDAERNLLLVKGAVPGA-KGSLVIIKPAVKAG 211 (212)
T ss_pred CCCCCCCCCEEEEECCCEEEEEECCCCEEEEEECCCCC-CCCEEEEEECEECC
T ss_conf 98798648716887487999996888989998468789-99899996140058