HHsearch results for GI: 254780261 and protein with PDBid: 2ftc_C
>2ftc_C L3MT, MRP-L3, mitochondrial 39S ribosomal protein L3; mitochondrial ribosome, large ribosomal subunit, ribosomal RNA; 12.10A {Bos taurus}
Probab=100.00 E-value=0 Score=563.21 Aligned_cols=209 Identities=33% Similarity=0.547 Sum_probs=197.8
Q ss_pred CCCEEEEECCCCEEECCCCCEEEEEEEEECCCEEEEEEECCCCCCEEEEECCCCCC--CCCCCCCHHHHHHHHCCCCCCE
Q ss_conf 44268996584516988987922689991797899997067788612564055556--4315710112576403563410
Q gi|254780261|r 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--VKNVSKPMRGFFSSVNVSPKKK 79 (221)
Q Consensus 2 r~Glig~KiGMT~if~e~G~~vpVTViev~~~~Vv~~kt~ekdGY~Avqvg~~~~k--~k~~~Kp~~G~fkK~g~~pk~~ 79 (221)
|+||||+|+||||+|||||.++||||||++||.|++++|.|+|+|.++||+++..+ ..+.+++.++||+|++++|+++
T Consensus 1 R~Glig~KiGMT~if~~~G~~vpVTVlev~p~~Vv~~kt~e~~~~~~~~v~~g~~~~~~~~k~k~~~g~~~k~~~~~k~~ 80 (211)
T 2ftc_C 1 RVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSRFRKATSILEFYRELGLPPKQT 80 (211)
T ss_pred CEEEEEEECCCCEEECCCCCEEEEEEEEECCCEEEEEEEEECCCCCEEEEEECCEECCCCCCCCHHCCCHHHCCCCCCEE
T ss_conf 91899996587077889996988899996288899998640458716777307500100012200104054507887603
Q ss_pred EEEEECCCCHHHHHCCCCEEEEEECCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf 36532065112110034100012302532657898753433640575044212333577454346665555567522422
Q gi|254780261|r 80 LFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159 (221)
Q Consensus 80 l~Efrv~~~~~~~~vG~~i~~~~F~~Gq~VDV~g~SkGKGFqGviKR~gf~g~~~sHG~sk~hR~~GsiG~~~~PgRV~k 159 (221)
++|||++++ +.+++|++|++|+|++||+|||+|+||||||||+||||||+++|+|||+|++||+|||||+ ++||||||
T Consensus 81 l~Efrv~~~-~~~~~G~~i~v~~F~~Gq~VdVtg~SKGKGFqGvmKRh~F~g~~~sHG~s~~hR~~GSiG~-~~pgRV~k 158 (211)
T 2ftc_C 81 VKIFNITDN-AAIKPGTPLYAAHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWP 158 (211)
T ss_pred EEEEECCCC-CCCCCCCEEECHHHCCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCC
T ss_conf 799963764-0102676078453448853898998758644650545676657743467765757851345-65887885
Q ss_pred CCCCCCCCCCEEEEECCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCC
Q ss_conf 676665237733365165899980768989997157458887099996031467
Q gi|254780261|r 160 NKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 (221)
Q Consensus 160 Gkkm~G~mG~~~~T~~nl~i~~id~e~n~i~vkGsVPG~~~~~~v~ir~a~k~~ 213 (221)
|+|||||||++++|++||+|++||+|+|||||||||||| ++++|+||+|++++
T Consensus 159 GkkM~G~mG~~~~T~~nl~vv~id~e~n~i~vkGsVPG~-~~~~V~ir~a~~pa 211 (211)
T 2ftc_C 159 GTKMPGKMGNIYRTEYGLKVWRINTKHNIIYVNGSVPGH-KNCLVKVKDSKLPA 211 (211)
T ss_pred CCCCCCCCCCCEEEEECCEEEEEECCCCEEEEEECCCCC-CCCEEEEEECCCCC
T ss_conf 773477437725988288999995878989994168689-99899997366589