HHsearch results for GI: 254780261 and protein with PDBid: 3bbo_F
>3bbo_F Ribosomal protein L3; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Nicotiana tabacum}
Probab=100.00 E-value=0 Score=580.02 Aligned_cols=211 Identities=39% Similarity=0.666 Sum_probs=201.0
Q ss_pred CCCCEEEEECCCCEEECCCCCEEEEEEEEECCCEEE-EEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCE
Q ss_conf 944268996584516988987922689991797899-9970677886125640555564315710112576403563410
Q gi|254780261|r 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVV-VHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKK 79 (221)
Q Consensus 1 mr~Glig~KiGMT~if~e~G~~vpVTViev~~~~Vv-~~kt~ekdGY~Avqvg~~~~k~k~~~Kp~~G~fkK~g~~pk~~ 79 (221)
+++||||+|+||||+||+||.++||||||++||.|+ |+||.|+|||+|+||||++.++++++||++|||+|++++|+++
T Consensus 42 ~~iGliG~KvGMT~if~~~G~~vPVTViev~p~~VV~qvkt~ekdGY~Avqvg~~~~k~k~~~Kp~~G~f~ka~~~pk~~ 121 (259)
T 3bbo_F 42 AGVGVMATKLGMMSFFEESGTVVPVTVVGFREGNIVTQIKTEATDGYNAVQVGYRRVRDRKLTKPEMGHLEKSGIIPLRH 121 (259)
T ss_dssp ---------------------------------------------------------CCSSCCHHHHTTCSSCCCCCSSC
T ss_pred CCEEEEEEECCCCEEECCCCCEEEEEEEEECCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCHHHHCCHHHCCCCCCEE
T ss_conf 36379999668847888999299779999579969988545455894489999987355235966836702202251014
Q ss_pred EEEEECCCCHHHHHCCCCEEE-EEECCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 365320651121100341000-1230253265789875343364057504421233357745434666555556752242
Q gi|254780261|r 80 LFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVF 158 (221)
Q Consensus 80 l~Efrv~~~~~~~~vG~~i~~-~~F~~Gq~VDV~g~SkGKGFqGviKR~gf~g~~~sHG~sk~hR~~GsiG~~~~PgRV~ 158 (221)
+.||+++++++ +++|++|++ |+|++||+|||+|+|||||||||||||||+|+|+||| |++||+|||||+||+|||||
T Consensus 122 ~~ef~~~~~~~-~~~G~~i~v~~~F~~Gq~VDVtg~SKGKGFqGvmKRhgF~g~pasHG-~~~hR~~GSiG~~~~PgRV~ 199 (259)
T 3bbo_F 122 LQEFRLQSIDG-FEVTQKLDFGELFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGQMTHG-SKSHRQLGSIGAGTTPGRVY 199 (259)
T ss_dssp CCCCCSCCCCT-TTTCCCCSSCSSSCSSSCCCCCCBCCCCSSCCSSSSSCCCCCCSSSC-SSTTTSCCCCSCSSCCTTTT
T ss_pred EEEEECCCCHH-CCCCCEECHHHHCCCCCEEEEEEEEECCCCCCCEEECCCCCCCCCCC-CCCCCCCCCCCCCCCCCEEC
T ss_conf 44442023000-03565442899435887788799981753665235636456675678-98786688647788898581
Q ss_pred CCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCCC
Q ss_conf 26766652377333651658999807689899971574588870999960314677
Q gi|254780261|r 159 KNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 (221)
Q Consensus 159 kGkkm~G~mG~~~~T~~nl~i~~id~e~n~i~vkGsVPG~~~~~~v~ir~a~k~~~ 214 (221)
||+|||||||++++|++||+|++||+|+|||||||||||+ +|++|+||||++...
T Consensus 200 kGkkMaG~mG~~~~Tv~Nl~Vv~Id~e~nlilVkGsVPG~-~g~~V~Ir~a~~~~k 254 (259)
T 3bbo_F 200 KGKKMPGRMGGTKRKIRKLKIVKIDDQLNIIMIKGALPGK-PGNLLRIAPAKIVGK 254 (259)
T ss_dssp TTSCCCCCCCCCBCCCCCCCEEEEETTTTEEEECSCCSSC-SSSCCCCCCCCCC--
T ss_pred CCCCCCCCCCCCEEEEECCEEEEECCCCCEEEEEECCCCC-CCCEEEEEECCCCCC
T ss_conf 5876687618853898556999982889989993168789-998899976775688