PSIBLAST alignment of GI: 254780261 and protein with PDB id: 1giy

>gi|14278035|pdb|1GIY|E Chain E, Crystal Structure Of The Ribosome At 5.5 A Resolution. This File, 1giy, Contains The 50s Ribosome Subunit. The 30s Ribosome Subunit, Three Trna, And Mrna Molecules Are In The File 1gix Length = 338
>gi|28373724|pdb|1ML5|EE Chain e, Structure Of The E. Coli Ribosomal Termination Complex With Release Factor 2 Length = 338

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/280 (17%), Positives = 79/280 (28%), Gaps = 72/280 (25%)

Query: 4   GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
           G    K GMT V  +              +PVTV+     + V  R  +   Y    +  
Sbjct: 40  GFAGYKAGMTHVVLVNDEPNSPREGMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTE 99

Query: 54  GEAKVKN--VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSY--------- 102
                 +  + + +           + ++ +     D   L + +   P           
Sbjct: 100 VWTDEFHSELDRTLSDRLDHALDIVEDQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKP 159

Query: 103 ----------------------------------FTVGQLVDVTGMTIGKGFSGAMKRHN 128
                                             F  G+  DV G+T GKG  G +KR  
Sbjct: 160 DVMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWG 219

Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------ 182
               +  H      R  G+ G   +P RV       G+ G ++ T  N  ++ +      
Sbjct: 220 VQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEP 278

Query: 183 ----------DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
                     +      LVKG VPG  K      R + + 
Sbjct: 279 TVDGGFVNYGEVDGPYTLVKGSVPGPDKRLVPFFRPAVRP 318