PSIBLAST alignment of GI: 254780261 and protein with PDB id: 1nkw
gi|28948921|pdb|1NKW|B Chain B, Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans Length = 211
>gi|29726789|pdb|1NWX|B Chain B, Complex Of The Large Ribosomal Subunit From Deinococcus Radiodurans With Abt-773 Length = 211
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 88/204 (43%), Positives = 116/204 (56%), Gaps = 6/204 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ K+GMT ++ R IPVTV+ C +V +T +GY AVQ+G + V
Sbjct: 1 MKGILGTKIGMTQIW-KNDRAIPVTVVLAGPCPIVQRKTAQTDGYEAVQIGYAPKAERKV 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KPM+G F+ V+P + L EFR D G + F G+ +D TG + GKG
Sbjct: 60 NKPMQGHFAKAGVAPTRILREFRGFAPD-----GDSVNVDIFAEGEKIDATGTSKGKGTQ 114
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR NF G A+HG HR GS G R+ PGRV+K K+MAG MG RVTV+NLEVV
Sbjct: 115 GVMKRWNFAGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGHMGMERVTVQNLEVVE 174
Query: 182 VDDKRGLILVKGCVPGAKKNSWIL 205
+ LILVKG +PGA +L
Sbjct: 175 IRAGENLILVKGAIPGANGGLVVL 198