PSIBLAST alignment of GI: 254780261 and protein with PDB id: 1nkw

gi|28948921|pdb|1NKW|B Chain B, Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans Length = 211
>gi|29726789|pdb|1NWX|B Chain B, Complex Of The Large Ribosomal Subunit From Deinococcus Radiodurans With Abt-773 Length = 211
 Score =  192 bits (488), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 88/204 (43%), Positives = 116/204 (56%), Gaps = 6/204 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
             G++  K+GMT ++    R IPVTV+    C +V  +T   +GY AVQ+G      + V
Sbjct: 1   MKGILGTKIGMTQIW-KNDRAIPVTVVLAGPCPIVQRKTAQTDGYEAVQIGYAPKAERKV 59

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KPM+G F+   V+P + L EFR    D     G   +   F  G+ +D TG + GKG  
Sbjct: 60  NKPMQGHFAKAGVAPTRILREFRGFAPD-----GDSVNVDIFAEGEKIDATGTSKGKGTQ 114

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR NF G  A+HG    HR  GS G R+ PGRV+K K+MAG MG  RVTV+NLEVV 
Sbjct: 115 GVMKRWNFAGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGHMGMERVTVQNLEVVE 174

Query: 182 VDDKRGLILVKGCVPGAKKNSWIL 205
           +     LILVKG +PGA     +L
Sbjct: 175 IRAGENLILVKGAIPGANGGLVVL 198