RPSBLAST alignment for GI: 254780261 and conserved domain: TIGR03626
>gnl|CDD|163363 TIGR03626, L3_arch, archaeal ribosomal protein L3. This model describes exclusively the archaeal class of ribosomal protein L3. A separate model (TIGR03625) describes the bacterial/organelle form, and both belong to Pfam family pfam00297. Eukaryotic proteins are excluded from this model. Length = 330
Score = 63.9 bits (156), Expect = 3e-11
Identities = 48/154 (31%), Positives = 63/154 (40%), Gaps = 32/154 (20%)
Query: 76 PKKK--LFEFRVQKDD---------DLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGA 123
PKKK + E R+ +L G S S F GQLVDV +T GKGF G
Sbjct: 151 PKKKPEIMEIRIGGGSVEERFEYALSIL--GKEISVSDVFKEGQLVDVIAVTKGKGFQGV 208
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
+KR L H R G+ G P RV AG+MG ++ T N ++ +
Sbjct: 209 VKRWGVKLLPRKHKRRKGGRHIGTLGPWT-PSRVRWTVPQAGQMGYHQRTEYNKRILKIG 267
Query: 184 D------------KRGL-----ILVKGCVPGAKK 200
+ GL +L+KG VPG K
Sbjct: 268 EDGDEITPKGGFVNYGLVRNDYVLIKGSVPGPSK 301