RPSBLAST alignment of GI: 254780261 and MMDB domain: 2j01_E_

>2j01_E (E:) 50S ribosomal protein L3; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus}Length = 206

 Score =  196 bits (500), Expect = 2e-51
 Identities = 91/211 (43%), Positives = 124/211 (58%), Gaps = 7/211 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  K+GMT ++  + R +PVTV+    C VV  RT +K+GY AVQ+G      K V+
Sbjct: 2   KGILGVKVGMTRIFR-DDRAVPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLPQNPKRVN 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +P++G F+   V P + L E R    +     G   +   F  G+ VDVTG + G+GF+G
Sbjct: 61  RPLKGHFAKAGVEPVRILREIRDFNPE-----GDTVTVEIFKPGERVDVTGTSKGRGFAG 115

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKR NF G   +HG    HR  GS G R+ PGRV+K KKMAG  G  RVTV NLEVV V
Sbjct: 116 VMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGHYGAERVTVMNLEVVDV 175

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             +  L+LVKG VPG      ++VR++ K+A
Sbjct: 176 IPEENLLLVKGAVPGP-NGGLVIVRETKKAA 205