RPSBLAST alignment of GI: 254780261 and protein with PDBid: 2j01

>2j01_E 50S ribosomal protein L3; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} SCOP: b.43.3.2 PDB: 1vsp_C 2hgj_E 2hgq_E 2hgu_E 1vsa_C 2j03_E 2jl6_E 2jl8_E 2v47_E 2v49_E 2wdi_E 2wdj_E 2wdl_E 2wdn_E 2wh2_E 2wh4_E 3d5b_E 3d5d_E 3f1f_E 3f1h_E ... Length = 206
 Score =  169 bits (429), Expect = 4e-43
 Identities = 90/211 (42%), Positives = 123/211 (58%), Gaps = 7/211 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  K+GMT ++  + R +PVTV+    C VV  RT +K+GY AVQ+G      K V+
Sbjct: 2   KGILGVKVGMTRIFR-DDRAVPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLPQNPKRVN 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +P++G F+   V P + L E R    +         +   F  G+ VDVTG + G+GF+G
Sbjct: 61  RPLKGHFAKAGVEPVRILREIRDFNPEG-----DTVTVEIFKPGERVDVTGTSKGRGFAG 115

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKR NF G   +HG    HR  GS G R+ PGRV+K KKMAG  G  RVTV NLEVV V
Sbjct: 116 VMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGHYGAERVTVMNLEVVDV 175

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             +  L+LVKG VPG      ++VR++ K+A
Sbjct: 176 IPEENLLLVKGAVPGP-NGGLVIVRETKKAA 205