HHsearch results for GI: 254780262 and protein with PDBid: 2vqe_J
>2vqe_J 30S ribosomal protein S10, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: d.58.15.1 PDB: 1gix_M* 1hnw_J* 1hnx_J* 1hnz_J* 1hr0_J 1ibk_J* 1ibl_J* 1ibm_J 1jgo_M* 1jgp_M* 1jgq_M* 1ml5_M* 1xmo_J* 1xmq_J* 1xnq_J* 1xnr_J* 1yl4_M 2b64_J* 2b9m_J* 2b9o_J* ...
Probab=100.00 E-value=1.2e-37 Score=239.32 Aligned_cols=99 Identities=44% Similarity=0.776 Sum_probs=97.2
Q ss_pred EEEEEEEEEECHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEEEEECCCCCCCCCHHHHHEEEEEEEEEEECCCHHH
Q ss_conf 48999999716889999999999999971880115648982136998730678986314235223344578797699899
Q gi|254780262|r 6 IRICICLKAFDSRILDSSMREIVLTTKKSGSQIVGPIPFPRSIRRFTVNRSPHVDKKSRDQLEMRIYKRLLYIIKPTPQT 85 (104)
Q Consensus 6 ~kirIkl~s~d~~~Ld~~~~~i~~~a~~~g~~v~GpipLPtk~~~~tvlrSPhv~KksreqfE~r~hkRlI~i~~~~~~~ 85 (104)
|||||+|+|||+.+||++|++|+++|+++|++++||+||||++.+||++||||++|+||||||+|+|+|+|+|+++++++
T Consensus 2 ~kirI~l~s~d~~~L~~~~~~i~~~a~~~g~~v~gpipLPtk~~~~tvlrSphv~kksreqfE~rthkRli~i~~~~~~~ 81 (105)
T 2vqe_J 2 PKIRIKLRGFDHKTLDASAQKIVEAARRSGAQVSGPIPLPTRVRRFTVIRGPFKHKDSREHFELRTHNRLVDIINPNRKT 81 (105)
T ss_dssp -CBCEEEEESCSSTTTTTTTHHHHTTTSSSCCCCCCCCCCCBCCEEECCSSSSSCTTCCCEEECCBEEECCCBSSCCTTH
T ss_pred CEEEEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHEEEEEEEEEEEEEECCCHHH
T ss_conf 76999999806899999999999999982995347778985889998740787999712238999999999996899899
Q ss_pred HHHHHCCCCCCCCEEEEEC
Q ss_conf 9998647899984589989
Q gi|254780262|r 86 VDALMKLDIAAGVNVVIKL 104 (104)
Q Consensus 86 ~~~l~~~~lp~gV~i~i~~ 104 (104)
++.|+++++|+||+|+|++
T Consensus 82 ~~~l~~~~lP~GV~ieI~~ 100 (105)
T 2vqe_J 82 IEQLMTLDLPTGVEIEIKT 100 (105)
T ss_dssp HHHSSSCCCCSSCEEEECC
T ss_pred HHHHHCCCCCCCCEEEEEE
T ss_conf 9998678799995799999