HHsearch results for GI: 254780262 and protein with PDBid: 3jyv_J
>3jyv_J 40S ribosomal protein S20; eukaryotic ribosome, RACK1 protein, flexible fitting; HET: 2MG H2U M2G OMC OMG YYG PSU 5MC 7MG 5MU 1MA; 8.90A {Thermomyces lanuginosus} PDB: 1s1h_J
Probab=100.00 E-value=5e-36 Score=229.83 Aligned_cols=95 Identities=25% Similarity=0.459 Sum_probs=91.4
Q ss_pred EEEEEEEEECHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEEEEECCCCCC-CCCHHHHHEEEEEEEEEEECCCHHH
Q ss_conf 899999971688999999999999997188011564898213699873067898-6314235223344578797699899
Q gi|254780262|r 7 RICICLKAFDSRILDSSMREIVLTTKKSGSQIVGPIPFPRSIRRFTVNRSPHVD-KKSRDQLEMRIYKRLLYIIKPTPQT 85 (104)
Q Consensus 7 kirIkl~s~d~~~Ld~~~~~i~~~a~~~g~~v~GpipLPtk~~~~tvlrSPhv~-KksreqfE~r~hkRlI~i~~~~~~~ 85 (104)
||||+|+|||++.||.+|++|+++|+.+|+.++||+||||++++||++||||++ |+||||||||+|||+|+|+++ +++
T Consensus 1 kirI~L~S~d~~~Ld~~~~~I~~~a~~~g~~~~GPipLPtk~~~~tvlrSPhvd~kksreqfE~r~hkRlI~i~~~-~~~ 79 (96)
T 3jyv_J 1 KIRITLTSTKVKQLENVSSNIVKNAEQHNLVKKGPVRLPTKVLKISTRKTPNGEGSKTWETYEMRIHKRYIDLEAP-VQI 79 (96)
T ss_dssp CBCCEEEESSHHHHHHHHHHHHHHTCSSSCCEEECCCCCCCCCCEEECSSCSSSCSSCCEEECCCCEEECCEECCC-SGG
T ss_pred CEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHEEEEEEEEEEEEECC-HHH
T ss_conf 9899999678779999999999999980994258734996168999871787899967687799987899998687-899
Q ss_pred HHHHHCCCCCCCCEEEE
Q ss_conf 99986478999845899
Q gi|254780262|r 86 VDALMKLDIAAGVNVVI 102 (104)
Q Consensus 86 ~~~l~~~~lp~gV~i~i 102 (104)
+++||++++|+||+|||
T Consensus 80 ~~~l~~~~lp~gV~iei 96 (96)
T 3jyv_J 80 VKRITQITIEPGVDVEV 96 (96)
T ss_dssp GSGGGGCCCCTTSEEEC
T ss_pred HHHHHCCCCCCCCEEEC
T ss_conf 99986898999936869