HHSEARCH alignment of GI: 254780262 and SCOP domain: d2uubj1

Alignment

Probab=100.00  E-value=5.2e-38  Score=240.00  Aligned_cols=97  Identities=45%  Similarity=0.805  Sum_probs=95.5

Q ss_pred             EEEEEEEEECHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEEEEECCCCCCCCCHHHHHEEEEEEEEEEECCCHHHH
Q ss_conf             89999997168899999999999999718801156489821369987306789863142352233445787976998999
Q gi|254780262|r    7 RICICLKAFDSRILDSSMREIVLTTKKSGSQIVGPIPFPRSIRRFTVNRSPHVDKKSRDQLEMRIYKRLLYIIKPTPQTV   86 (104)
Q Consensus         7 kirIkl~s~d~~~Ld~~~~~i~~~a~~~g~~v~GpipLPtk~~~~tvlrSPhv~KksreqfE~r~hkRlI~i~~~~~~~~   86 (104)
                      ||||+|+|||+.+||++|++|+++|+.+|++++||+||||++.+||++||||+||+||||||||+|+|+|+|++++++++
T Consensus         1 kirI~l~s~d~~~Ld~~~~~i~~~a~~~g~~v~gpipLPtk~~~~tvlrSphv~kksreqfE~rthkR~i~i~~~~~~~~   80 (98)
T d2uubj1           1 KIRIKLRGFDHKTLDASAQKIVEAARRSGAQVSGPIPLPTRVRRFTVIRGPFKHKDSREHFELRTHNRLVDIINPNRKTI   80 (98)
T ss_dssp             CCEEEEEESCHHHHHHHHHHHTHHHHTTSSCCCCEEEEEEEEEEEECCSSSSSCTTCCCEEEEEEEEEEEECSSCCTTHH
T ss_pred             CEEEEEEEECHHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEEEEEECCCCCCCHHHHHEEEEEEEEEEEECCCHHHH
T ss_conf             98999997268899999999999999819966067789958899999726879996388731258789999968998999


Q ss_pred             HHHHCCCCCCCCEEEEE
Q ss_conf             99864789998458998
Q gi|254780262|r   87 DALMKLDIAAGVNVVIK  103 (104)
Q Consensus        87 ~~l~~~~lp~gV~i~i~  103 (104)
                      +.|++++||+||+|+|+
T Consensus        81 ~~l~~~~lP~GV~i~ik   97 (98)
T d2uubj1          81 EQLMTLDLPTGVEIEIK   97 (98)
T ss_dssp             HHSSSCCCCSSCEECCC
T ss_pred             HHHHCCCCCCCCEEEEE
T ss_conf             99967879999379985

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Ribosomal protein S10
family: Ribosomal protein S10
domain: Ribosomal protein S10
species: Thermus thermophilus [TaxId: 274]