HHsearch alignment for GI: 254780263 and conserved domain: CHL00189

Probab=100.00  E-value=1.3e-44  Score=295.82  Aligned_cols=250  Identities=28%  Similarity=0.326  Sum_probs=185.4

Q ss_pred             CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEEC----CCEEEEEEECCCCHH
Q ss_conf             0388279999904689887899999987644420013126868698629206378999821----990899984787302
Q gi|254780263|r    8 RNKESLGLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYET----DKRFYSHIDCPGHAD   83 (392)
Q Consensus         8 ~~k~~~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~----~~~~i~iiD~PGH~~   83 (392)
T Consensus       269 ~~RpPV-VTIMGHVDHGKTsLLD~iR~-t~Va~~E-----------aGGITQhIGAy~V~~~~~~~~~~ITFlDTPGHeA  335 (770)
T CHL00189        269 IRRPPI-VTILGHVDHGKTTLLDAIRK-TNIAQKE-----------AGGITQKIGAYEVEVPYKDQNQKIVFLDTPGHEA  335 (770)
T ss_pred             CCCCCE-EEEECCCCCCHHHHHHHHHC-CCCCCCC-----------CCCCCCEECEEEEEECCCCCCCEEEEECCCCHHH
T ss_conf             778998-99857725772037888852-8851345-----------6765550352999751578897589955994688


Q ss_pred             HHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCEE-EEEEEEEEE
Q ss_conf             4677987740023314520123443321067788886318760233100233356122211012321001-110145322
Q gi|254780263|r   84 YVKNMITGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVDAVDDDELLDISEYEIRDL-LKEHKYSDD  162 (392)
Q Consensus        84 f~~~mi~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~-l~~~~~~~~  162 (392)
T Consensus       336 Ft~MRaRGA~vTDIvILVVAADDGVmPQTiEAI~hakaA~VP-iIVAINKiDkp~an--~~rVk~eL~e~gli~EewGGd  412 (770)
T CHL00189        336 FSSMRSRGANVTDIAILIVAADDGVKPQTIEAINHIQAANVP-IIVAINKIDKENAN--IDRVKQELSKYNLISEKWGGQ  412 (770)
T ss_pred             HHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCC-EEEEEECCCCCCCC--HHHHHHHHHHCCCCHHHCCCC
T ss_conf             999986278666679999965788567279999999876998-89998774589988--578999999869552223795


Q ss_pred             EECCCCEEEEEEECCCCCCCCCCCCCHHHHHHCCCC--CCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEECCCCCCCEE
Q ss_conf             102331146764114445652123320344310252--222100001100000001355445430148742453489679
Q gi|254780263|r  163 TPIIRGSALCALQGTNKELGEDSIHALMKAVDTHIP--TPQRSLDAPFLMHIEGSCGIEGRGTVVTGCIKRGRIKAGSDV  240 (392)
Q Consensus       163 ~pii~~sa~~g~~~~n~~~~~~~~~~Ll~~i~~~~~--~p~~~~~~p~r~~I~~vf~i~g~G~Vv~GrV~sG~l~~Gd~i  240 (392)
T Consensus       413 ~~~V~ISAktg~----------gId~LLE~IlL~AEvlELkAnp~~~A~GvVIES~ldkgrG~VATvLVQ~GTLkvGD~i  482 (770)
T CHL00189        413 TPMIPISALQGT----------NIDKLLEMILLLAEIENLQADPTQLAQGTILEAHLDKTKGPVATLLVQNGTLRIGDII  482 (770)
T ss_pred             EEEEEEEECCCC----------CHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCEEEEEEECCEECCCCEE
T ss_conf             599996616798----------8799999999998787523688986149999976516867768999954844039999


Q ss_pred             EEEECCCCCCCEEEECCCCC-CCCCCCCCCCHHHHH-HHCCCCCCEEECHHEEE
Q ss_conf             99506874321254121001-211443210013666-41124543220211773
Q gi|254780263|r  241 EIIGMGGKKLKVKCTDVEMF-RKKLDEAIAGDNVGL-LLRGVNRADVPRGRVVC  292 (392)
Q Consensus       241 ~i~p~~~~~~~~kv~si~~~-~~~v~~a~aGd~v~l-~Lkgi~~~di~rGdvl~  292 (392)
T Consensus       483 VaG~-----~~GKVRaM~Dd~Gk~vkeA~PS~PVeIlGl~~vP----~AGD~f~  527 (770)
T CHL00189        483 VAGT-----SLGKIRGMINSAGNKINEAGPSSPVEIWGLSSVP----ATGEYFQ  527 (770)
T ss_pred             EECC-----CEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCC----CCCCEEE
T ss_conf             9836-----3447889889999844554899868987787898----7798899