HHsearch alignment for GI: 254780263 and conserved domain: COG0480
>COG0480 FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=0 Score=334.87 Aligned_cols=276 Identities=26% Similarity=0.362 Sum_probs=199.0
Q ss_pred CEEEEEEEECCCCCHHHHHHHHHHHHHHH------HHCCCCCCCCHHHHHCCCEEEEEEEEEECCC-EEEEEEECCCCHH
Q ss_conf 82799999046898878999999876444------2001312686869862920637899982199-0899984787302
Q gi|254780263|r 11 ESLGLSTIGHVDHGKTTLTAAITKYYSEE------KKEYGDIDSAPEEKLRGITIATAHVSYETDK-RFYSHIDCPGHAD 83 (392)
Q Consensus 11 ~~~ni~~iGhvd~GKSTL~~~L~~~~~~~------~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~-~~i~iiD~PGH~~ 83 (392)
T Consensus 9 ~~RNigI~aHidaGKTTltE~lL~~tG~i~k~G~v~~g~~~~D~~e~EqeRGITI~saa~s~~~~~~~~iNlIDTPGHVD 88 (697)
T COG0480 9 RIRNIGIVAHIDAGKTTLTERILFYTGIISKIGEVHDGAATMDWMEQEQERGITITSAATTLFWKGDYRINLIDTPGHVD 88 (697)
T ss_pred CCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEEEEECCCEEEEEECCCCCCC
T ss_conf 54079999604788077889999875975778556678654788788986697786405689970865899957997353
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCH--HHHHHCCCCCCE---------
Q ss_conf 467798774002331452012344332106778888631876023310023335612--221101232100---------
Q gi|254780263|r 84 YVKNMITGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVDAVDDD--ELLDISEYEIRD--------- 152 (392)
Q Consensus 84 f~~~mi~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD~v~~~--~~~~~i~~~i~~--------- 152 (392)
T Consensus 89 Ft~EV~rslrvlDgavvVvdaveGV~~QTEtv~rqa~~~~vp~-i~fiNKmDR~~a~~~~~~~~l~~~l~~~~~~v~~pI 167 (697)
T COG0480 89 FTIEVERSLRVLDGAVVVVDAVEGVEPQTETVWRQADKYGVPR-ILFVNKMDRLGADFYLVVEQLKERLGANPVPVQLPI 167 (697)
T ss_pred CHHHHHHHHHHHCCEEEEEECCCCEEECHHHHHHHHHHCCCCE-EEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEECCC
T ss_conf 4778799888616509999887883003799999986559975-999978433556733509999998679832232111
Q ss_pred -----------EEE--EEEEEE--EEEC--CCCEEEEE------------------------EECCC-------------
Q ss_conf -----------111--014532--2102--33114676------------------------41144-------------
Q gi|254780263|r 153 -----------LLK--EHKYSD--DTPI--IRGSALCA------------------------LQGTN------------- 178 (392)
Q Consensus 153 -----------~l~--~~~~~~--~~pi--i~~sa~~g------------------------~~~~n------------- 178 (392)
T Consensus 168 g~~~~f~g~idl~~~~~~~~~~~~~~~~~~ip~~-~~~~~~e~r~~~~e~i~e~de~l~e~yl~g~e~~~~~i~~~i~~~ 246 (697)
T COG0480 168 GAEEEFEGVIDLVEMKAVAFGDGAKYEWIEIPAD-LKEIAEEAREKLLEALAEFDEELMEKYLEGEEPTEEEIKKALRKG 246 (697)
T ss_pred CCCCCCCCEEEHHHCCEEEECCCCCCCEEECCHH-HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 5730047636711067179757752431558778-876789999999998861579999998668876479999999876
Q ss_pred -------CC-----CCCCCCCCHHHHHHCCCCCCCC--------------------CCCCCCCEECCCCCCCCCCCCCEE
Q ss_conf -------45-----6521233203443102522221--------------------000011000000013554454301
Q gi|254780263|r 179 -------KE-----LGEDSIHALMKAVDTHIPTPQR--------------------SLDAPFLMHIEGSCGIEGRGTVVT 226 (392)
Q Consensus 179 -------~~-----~~~~~~~~Ll~~i~~~~~~p~~--------------------~~~~p~r~~I~~vf~i~g~G~Vv~ 226 (392)
T Consensus 247 ~~~~~~~pvl~gsa~kn~gv~~lLdav~~~lPsP~e~~~~~g~~~~~~~~~~~~~~~~e~p~~a~vfKi~~d~~~g~l~~ 326 (697)
T COG0480 247 TIAGKIVPVLCGSAFKNKGVQPLLDAVVDYLPSPLDVPPIKGDLDDEIEKAVLRKASDEGPLSALVFKIMTDPFVGKLTF 326 (697)
T ss_pred HHCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHCCCCCCCCCEEEEEEEEEECCCCCEEEE
T ss_conf 53266256775010257757999999998789956645444767753230000468888865999999686487875999
Q ss_pred EEEEECCCCCCCEEEEEECCCCCCCEEEECCCC----CCCCCCCCCCCHHHHHHHCCCCCCEEECHHEEECCC
Q ss_conf 487424534896799950687432125412100----121144321001366641124543220211773267
Q gi|254780263|r 227 GCIKRGRIKAGSDVEIIGMGGKKLKVKCTDVEM----FRKKLDEAIAGDNVGLLLRGVNRADVPRGRVVCAPG 295 (392)
Q Consensus 227 GrV~sG~l~~Gd~i~i~p~~~~~~~~kv~si~~----~~~~v~~a~aGd~v~l~Lkgi~~~di~rGdvl~~~~ 295 (392)
T Consensus 327 ~RvysGtl~~G~~v~n~~~~~---~erv~~l~~~~~~~~~~v~~~~AG~I~a~~----Gl~~~~tGdTl~~~~ 392 (697)
T COG0480 327 VRVYSGTLKSGSEVLNSTKGK---KERVGRLLLMHGNEREEVDEVPAGDIVALV----GLKDATTGDTLCDEN 392 (697)
T ss_pred EEEECCEECCCCEEEECCCCC---CEEEEEEEECCCCCEEECCCCCCCCEEEEE----CCCCCCCCCEEECCC
T ss_conf 998643773798899579985---378778987168950260540576489997----523554078565378