HHsearch alignment for GI: 254780263 and conserved domain: COG0532

>COG0532 InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis].
Probab=100.00  E-value=4.3e-39  Score=261.43  Aligned_cols=211  Identities=30%  Similarity=0.356  Sum_probs=161.2

Q ss_pred             CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECC---CEEEEEEECCCCHHHHH
Q ss_conf             882799999046898878999999876444200131268686986292063789998219---90899984787302467
Q gi|254780263|r   10 KESLGLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYETD---KRFYSHIDCPGHADYVK   86 (392)
Q Consensus        10 k~~~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~---~~~i~iiD~PGH~~f~~   86 (392)
T Consensus         4 R~Pv-VtimGHVDHGKTtLLD~IR~t-~Va~~E-----------aGGITQhIGA~~v~~~~~~~~~itFiDTPGHeAFt~   70 (509)
T COG0532           4 RPPV-VTIMGHVDHGKTTLLDKIRKT-NVAAGE-----------AGGITQHIGAYQVPLDVIKIPGITFIDTPGHEAFTA   70 (509)
T ss_pred             CCCE-EEEECCCCCCCCCHHHHHHCC-CCCCCC-----------CCCEEEEEEEEEEEECCCCCCEEEEECCCCHHHHHH
T ss_conf             8988-999674358842016667417-643566-----------785001743499986468865289974895788887


Q ss_pred             HHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCEE-EEEEEEEEEEEC
Q ss_conf             7987740023314520123443321067788886318760233100233356122211012321001-110145322102
Q gi|254780263|r   87 NMITGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVDAVDDDELLDISEYEIRDL-LKEHKYSDDTPI  165 (392)
Q Consensus        87 ~mi~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~-l~~~~~~~~~pi  165 (392)
T Consensus        71 mRaRGa~vtDIaILVVa~dDGv~pQTiEAI~hak~a~vP-~iVAiNKiDk~~~n--p~~v~~el~~~gl~~E~~gg~v~~  147 (509)
T COG0532          71 MRARGASVTDIAILVVAADDGVMPQTIEAINHAKAAGVP-IVVAINKIDKPEAN--PDKVKQELQEYGLVPEEWGGDVIF  147 (509)
T ss_pred             HHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCC-EEEEEECCCCCCCC--HHHHHHHHHHCCCCHHHCCCCEEE
T ss_conf             875577544579999975678566179999999877999-89998543279988--789999887779887661881499


Q ss_pred             CCCEEEEEEECCCCCCCCCCCCCHHHHHHCCCC--CCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEE
Q ss_conf             331146764114445652123320344310252--222100001100000001355445430148742453489679995
Q gi|254780263|r  166 IRGSALCALQGTNKELGEDSIHALMKAVDTHIP--TPQRSLDAPFLMHIEGSCGIEGRGTVVTGCIKRGRIKAGSDVEII  243 (392)
Q Consensus       166 i~~sa~~g~~~~n~~~~~~~~~~Ll~~i~~~~~--~p~~~~~~p~r~~I~~vf~i~g~G~Vv~GrV~sG~l~~Gd~i~i~  243 (392)
T Consensus       148 VpvSA~tg~----------Gi~eLL~~ill~aev~elka~~~~~a~gtviE~~~dkG~G~vatviv~~GtL~~GD~iv~g  217 (509)
T COG0532         148 VPVSAKTGE----------GIDELLELILLLAEVLELKANPEGPARGTVIEVKLDKGLGPVATVIVQDGTLKKGDIIVAG  217 (509)
T ss_pred             EEEECCCCC----------CHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEEEEEEECCEEECCCEEEEC
T ss_conf             974324787----------9799999999888998644288987249999998626887528999964847449999983


Q ss_pred             ECC
Q ss_conf             068
Q gi|254780263|r  244 GMG  246 (392)
Q Consensus       244 p~~  246 (392)
T Consensus       218 ~~~  220 (509)
T COG0532         218 GEY  220 (509)
T ss_pred             CCC
T ss_conf             787