HHsearch alignment for GI: 254780263 and conserved domain: COG5192

>COG5192 BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis].
Probab=98.96  E-value=9.3e-09  Score=73.38  Aligned_cols=113  Identities=19%  Similarity=0.322  Sum_probs=92.2

Q ss_pred             CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECCCEEEEEEECCCCHHHHHHHH
Q ss_conf             88279999904689887899999987644420013126868698629206378999821990899984787302467798
Q gi|254780263|r   10 KESLGLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYETDKRFYSHIDCPGHADYVKNMI   89 (392)
Q Consensus        10 k~~~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~~~i~iiD~PGH~~f~~~mi   89 (392)
T Consensus        67 PPPfIvavvGPpGtGKsTLirSlVrr~tk~ti---------~~i~GPiTvv------sgK~RRiTflEcp---~Dl~~mi  128 (1077)
T COG5192          67 PPPFIVAVVGPPGTGKSTLIRSLVRRFTKQTI---------DEIRGPITVV------SGKTRRITFLECP---SDLHQMI  128 (1077)
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH---------HCCCCCEEEE------ECCEEEEEEEECH---HHHHHHH
T ss_conf             99758996369988746899999999877542---------0367864786------1563578988671---7888887


Q ss_pred             HHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCH
Q ss_conf             774002331452012344332106778888631876023310023335612
Q gi|254780263|r   90 TGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVDAVDDD  140 (392)
Q Consensus        90 ~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD~v~~~  140 (392)
T Consensus       129 DvaKIaDLVlLlIdgnfGfEMETmEFLnil~~HGmPrvlgV~ThlDlfk~~  179 (1077)
T COG5192         129 DVAKIADLVLLLIDGNFGFEMETMEFLNILISHGMPRVLGVVTHLDLFKNP  179 (1077)
T ss_pred             HHHHHHHEEEEEECCCCCCEEHHHHHHHHHHHCCCCCEEEEEEECCCCCCH
T ss_conf             688752135788636667042488999998664897247888621133583