HHsearch alignment for GI: 254780263 and conserved domain: COG5192
>COG5192 BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis].
Probab=98.96 E-value=9.3e-09 Score=73.38 Aligned_cols=113 Identities=19% Similarity=0.322 Sum_probs=92.2
Q ss_pred CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECCCEEEEEEECCCCHHHHHHHH
Q ss_conf 88279999904689887899999987644420013126868698629206378999821990899984787302467798
Q gi|254780263|r 10 KESLGLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYETDKRFYSHIDCPGHADYVKNMI 89 (392)
Q Consensus 10 k~~~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~~~i~iiD~PGH~~f~~~mi 89 (392)
T Consensus 67 PPPfIvavvGPpGtGKsTLirSlVrr~tk~ti---------~~i~GPiTvv------sgK~RRiTflEcp---~Dl~~mi 128 (1077)
T COG5192 67 PPPFIVAVVGPPGTGKSTLIRSLVRRFTKQTI---------DEIRGPITVV------SGKTRRITFLECP---SDLHQMI 128 (1077)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH---------HCCCCCEEEE------ECCEEEEEEEECH---HHHHHHH
T ss_conf 99758996369988746899999999877542---------0367864786------1563578988671---7888887
Q ss_pred HHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCH
Q ss_conf 774002331452012344332106778888631876023310023335612
Q gi|254780263|r 90 TGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVDAVDDD 140 (392)
Q Consensus 90 ~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD~v~~~ 140 (392)
T Consensus 129 DvaKIaDLVlLlIdgnfGfEMETmEFLnil~~HGmPrvlgV~ThlDlfk~~ 179 (1077)
T COG5192 129 DVAKIADLVLLLIDGNFGFEMETMEFLNILISHGMPRVLGVVTHLDLFKNP 179 (1077)
T ss_pred HHHHHHHEEEEEECCCCCCEEHHHHHHHHHHHCCCCCEEEEEEECCCCCCH
T ss_conf 688752135788636667042488999998664897247888621133583