HHsearch alignment for GI: 254780263 and conserved domain: KOG0088
>KOG0088 consensus.
Probab=91.24 E-value=0.91 Score=23.83 Aligned_cols=108 Identities=19% Similarity=0.204 Sum_probs=61.1
Q ss_pred EEEEEEECCCCCHHHHHHHHHH-HHHHHHHCCCCCCCCHHHHHCCCEEEEEEE----EEECCCEEEEEEECCCCHHHHH-
Q ss_conf 7999990468988789999998-764442001312686869862920637899----9821990899984787302467-
Q gi|254780263|r 13 LGLSTIGHVDHGKTTLTAAITK-YYSEEKKEYGDIDSAPEEKLRGITIATAHV----SYETDKRFYSHIDCPGHADYVK- 86 (392)
Q Consensus 13 ~ni~~iGhvd~GKSTL~~~L~~-~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~----~~~~~~~~i~iiD~PGH~~f~~- 86 (392)
T Consensus 14 FK~VLLGEGCVGKtSLVLRy~EnkFn~-----------kH----lsTlQASF~~kk~n~ed~ra~L~IWDTAGQErfHAL 78 (218)
T KOG0088 14 FKIVLLGEGCVGKTSLVLRYVENKFNC-----------KH----LSTLQASFQNKKVNVEDCRADLHIWDTAGQERFHAL 78 (218)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCH-----------HH----HHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHCC
T ss_conf 689997487556068999998723230-----------46----789998876330462111311432124445765235
Q ss_pred -HHHHHHHCCCCEEEEECCCCCCCCCH--HHHHHHHHHCCCC-CEEEEECCCCCC
Q ss_conf -79877400233145201234433210--6778888631876-023310023335
Q gi|254780263|r 87 -NMITGATQADGAILVCAAEDGPKPQT--REHILLARQIGIS-SIVVYMNKVDAV 137 (392)
Q Consensus 87 -~mi~g~~~~D~ailvVda~~G~~~QT--~eh~~l~~~lgi~-~iIv~iNKmD~v 137 (392)
T Consensus 79 GPIY--YRgSnGalLVyDITDrdSFqKVKnWV~Elr~mlGnei~l~IVGNKiDLE 131 (218)
T KOG0088 79 GPIY--YRGSNGALLVYDITDRDSFQKVKNWVLELRTMLGNEIELLIVGNKIDLE 131 (218)
T ss_pred CCEE--EECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHH
T ss_conf 7537--7079962899864446889999999999998718835999953744678