HHsearch alignment for GI: 254780263 and conserved domain: KOG0090

Probab=97.96  E-value=8.5e-06  Score=55.00  Aligned_cols=127  Identities=18%  Similarity=0.244  Sum_probs=74.8

Q ss_pred             EEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECCCEEEEEEECCCCHHHHHHHHHHHH
Q ss_conf             99999046898878999999876444200131268686986292063789998219908999847873024677987740
Q gi|254780263|r   14 GLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYETDKRFYSHIDCPGHADYVKNMITGAT   93 (392)
Q Consensus        14 ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~~~i~iiD~PGH~~f~~~mi~g~~   93 (392)
T Consensus        40 ~Vll~Gl~dSGKT~LF~qL~~gs~~~---------------TvtSiepn~a~~r~gs~~~~LVD~PGH~rlR~kl~e~~~  104 (238)
T KOG0090          40 AVLLVGLSDSGKTSLFTQLITGSHRG---------------TVTSIEPNEATYRLGSENVTLVDLPGHSRLRRKLLEYLK  104 (238)
T ss_pred             CEEEEECCCCCCEEEEEEHHCCCCCC---------------EEEEECCCEEEEEECCCCEEEEECCCCHHHHHHHHHHCC
T ss_conf             68999327898335542001387367---------------032104661357636862388757995889999998734


Q ss_pred             ---CCCCEEEEECCCCCCCCC--HHHHHH-H-HHH---CCCCCEEEEECCCCCCCC--H-HHHHHCCCCCCEEEE
Q ss_conf             ---023314520123443321--067788-8-863---187602331002333561--2-221101232100111
Q gi|254780263|r   94 ---QADGAILVCAAEDGPKPQ--TREHIL-L-ARQ---IGISSIVVYMNKVDAVDD--D-ELLDISEYEIRDLLK  155 (392)
Q Consensus        94 ---~~D~ailvVda~~G~~~Q--T~eh~~-l-~~~---lgi~~iIv~iNKmD~v~~--~-~~~~~i~~~i~~~l~  155 (392)
T Consensus       105 ~~~~akaiVFVVDSa~f~k~vrdvaefLydil~~~~~~~~~~~vLIaCNKqDl~tAkt~~~Ir~~LEkEi~~lr~  179 (238)
T KOG0090         105 HNYSAKAIVFVVDSATFLKNVRDVAEFLYDILLDSRVKKNKPPVLIACNKQDLFTAKTAEKIRQQLEKEIHKLRE  179 (238)
T ss_pred             CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf             655221599998332246006799999999998601234799889995552232138599999999999999998