HHsearch alignment for GI: 254780263 and conserved domain: KOG3905

Probab=96.35  E-value=0.0052  Score=37.73  Aligned_cols=141  Identities=24%  Similarity=0.296  Sum_probs=75.7

Q ss_pred             EEEEEEECCCCCHHHHHHHHHHHHH---HHHHCCCCCCCCHHHHHCCCEEEEEEEEEECCCEEEEEEE-CCCCHHHHHHH
Q ss_conf             7999990468988789999998764---4420013126868698629206378999821990899984-78730246779
Q gi|254780263|r   13 LGLSTIGHVDHGKTTLTAAITKYYS---EEKKEYGDIDSAPEEKLRGITIATAHVSYETDKRFYSHID-CPGHADYVKNM   88 (392)
Q Consensus        13 ~ni~~iGhvd~GKSTL~~~L~~~~~---~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~~~i~iiD-~PGH~~f~~~m   88 (392)
T Consensus        53 k~VlvlGdn~sGKtsLi~klqg~e~~KkgsgLeY~yl~V~de~RDd------------~tr~~VWiLDGd~~h~~LLk~a  120 (473)
T KOG3905          53 KNVLVLGDNGSGKTSLISKLQGSETVKKGSGLEYLYLHVHDEDRDD------------LTRCNVWILDGDLYHKGLLKFA  120 (473)
T ss_pred             CEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHH------------HHHCCEEEECCCHHHHHHHHHC
T ss_conf             7489973688860588887515655677877505898624423002------------3306648865856665577640


Q ss_pred             HHHHHCCCC-EEEEECCCCCCC--------------------------------------------------CCHH----
Q ss_conf             877400233-145201234433--------------------------------------------------2106----
Q gi|254780263|r   89 ITGATQADG-AILVCAAEDGPK--------------------------------------------------PQTR----  113 (392)
Q Consensus        89 i~g~~~~D~-ailvVda~~G~~--------------------------------------------------~QT~----  113 (392)
T Consensus       121 l~ats~aetlviltasms~Pw~~lesLqkWa~Vl~ehidkl~i~~ee~ka~rqk~~k~wQeYvep~e~~pgsp~~r~t~~  200 (473)
T KOG3905         121 LPATSLAETLVILTASMSNPWTLLESLQKWASVLREHIDKLKIPPEEMKAGRQKLEKDWQEYVEPGEDQPGSPQRRTTVV  200 (473)
T ss_pred             CCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf             56667343289999745882779999999999999998850499999999999999889985481336889842243454


Q ss_pred             -----HHHH-------HHHHCCCCCEEEEECCCCCCCC--------HHHHHHCCCCCCEEEEEEEEEEEEECCCCEE
Q ss_conf             -----7788-------8863187602331002333561--------2221101232100111014532210233114
Q gi|254780263|r  114 -----EHIL-------LARQIGISSIVVYMNKVDAVDD--------DELLDISEYEIRDLLKEHKYSDDTPIIRGSA  170 (392)
Q Consensus       114 -----eh~~-------l~~~lgi~~iIv~iNKmD~v~~--------~~~~~~i~~~i~~~l~~~~~~~~~pii~~sa  170 (392)
T Consensus       201 ~~~~de~~llPL~~dtLt~NlGi~-vlVV~TK~D~~s~leke~eyrDehfdfiq~~lRkFCLr~Ga----aLiyTSv  272 (473)
T KOG3905         201 GSSADEHVLLPLGQDTLTHNLGIP-VLVVCTKCDAVSVLEKEHEYRDEHFDFIQSHLRKFCLRYGA----ALIYTSV  272 (473)
T ss_pred             CCCCCCCCCCCCCCCCHHHCCCCC-EEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC----EEEEEEC
T ss_conf             676543220446776112127974-79999534236676530100588899999999999987084----3688521