HHsearch alignment for GI: 254780263 and conserved domain: PRK00771

>PRK00771 signal recognition particle protein Srp54; Provisional.
Probab=97.87  E-value=0.00011  Score=48.19  Aligned_cols=125  Identities=23%  Similarity=0.336  Sum_probs=72.5

Q ss_pred             HCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC--CCCC--H-HHH------HCCCEEEEE----------EEE
Q ss_conf             103882799999046898878999999876444200131--2686--8-698------629206378----------999
Q gi|254780263|r    7 VRNKESLGLSTIGHVDHGKTTLTAAITKYYSEEKKEYGD--IDSA--P-EEK------LRGITIATA----------HVS   65 (392)
Q Consensus         7 ~~~k~~~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~--~D~~--~-~E~------~rGiTi~~~----------~~~   65 (392)
T Consensus        93 ~~~kP~V-im~vGlqGsGKTTT~aKLA~~~kk~g~kv~lvaaDt~RpaA~eQL~~la~~~~v~~~~~~~~~dp~~i~~~a  171 (433)
T PRK00771         93 ILLKPQT-ILLVGLQGSGKTTTAAKLARYFQKKGLKVGVICADTWRPGAYEQLKQLCEKINVPFYGDPKEKDAVKIVKEG  171 (433)
T ss_pred             CCCCCEE-EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
T ss_conf             6689858-999737889789999999999997799467850678836899999999986388731788999999999999


Q ss_pred             E-ECCCEEEEEEECCCC----HHHHHHH--HHHHHCCCCEEEEECCCCCCCC--CHHHHHHHHHHCCCCCEEEEECCCCC
Q ss_conf             8-219908999847873----0246779--8774002331452012344332--10677888863187602331002333
Q gi|254780263|r   66 Y-ETDKRFYSHIDCPGH----ADYVKNM--ITGATQADGAILVCAAEDGPKP--QTREHILLARQIGISSIVVYMNKVDA  136 (392)
Q Consensus        66 ~-~~~~~~i~iiD~PGH----~~f~~~m--i~g~~~~D~ailvVda~~G~~~--QT~eh~~l~~~lgi~~iIv~iNKmD~  136 (392)
T Consensus       172 ~~~~k~~DvviiDTAGRl~~d~~Lm~El~~i~~~~~P~e~llV~Da~~GQ~a~~~a~---~F~~~~~i~-gvI-lTKlDg  246 (433)
T PRK00771        172 LEKLKKVDVIIVDTAGRHKLEKDLIEEMKQIKEITKPDEVILVIDATIGQQASEQAK---AFKEAVGIG-GII-ITKLDG  246 (433)
T ss_pred             HHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHH---HHHHHCCCC-EEE-EECCCC
T ss_conf             998456988999776521040999999999987757976899865442267899999---998753887-379-972567


Q ss_pred             C
Q ss_conf             5
Q gi|254780263|r  137 V  137 (392)
Q Consensus       137 v  137 (392)
T Consensus       247 d  247 (433)
T PRK00771        247 T  247 (433)
T ss_pred             C
T ss_conf             8