HHsearch alignment for GI: 254780263 and conserved domain: PRK05291
>PRK05291 trmE tRNA modification GTPase TrmE; Reviewed.
Probab=99.30 E-value=2e-11 Score=89.86 Aligned_cols=145 Identities=23% Similarity=0.269 Sum_probs=97.0
Q ss_pred CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECCCEEEEEEECCCCHH---HH-
Q ss_conf 88279999904689887899999987644420013126868698629206378999821990899984787302---46-
Q gi|254780263|r 10 KESLGLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYETDKRFYSHIDCPGHAD---YV- 85 (392)
Q Consensus 10 k~~~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~~~i~iiD~PGH~~---f~- 85 (392)
T Consensus 214 ~~G~~v~i~G~PN~GKSSL~N~L~~~drAIV-----S~------ipGTTRD~ie~~l~l~G~~v~l~DTAGiR~t~d~IE 282 (445)
T PRK05291 214 REGLKVVIAGRPNVGKSSLLNALLGEERAIV-----TD------IAGTTRDVIEEHINLDGIPLRLIDTAGIRETEDEVE 282 (445)
T ss_pred HCCCEEEEECCCCCCHHHHHHHHHCCCCEEE-----CC------CCCCCCCEEEEEEEECCEEEEEEECCCCCCCCCHHH
T ss_conf 3598699889998768999999857874673-----18------999740402236899998999998997665574588
Q ss_pred ----HHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEEEE
Q ss_conf ----7798774002331452012344332106778888631876023310023335612221101232100111014532
Q gi|254780263|r 86 ----KNMITGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVDAVDDDELLDISEYEIRDLLKEHKYSD 161 (392)
Q Consensus 86 ----~~mi~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~l~~~~~~~ 161 (392)
T Consensus 283 ~~GI~ra~~~~~~ADlil~v~D~s~~~~~~~~---~~~~~~~~~~~i~V~NK~DL~~~~~-------------------~ 340 (445)
T PRK05291 283 KIGIERSRKAIEEADLVLLVLDASEPLTEEDK---EILEEFKNKPVIVVLNKADLTGEKI-------------------D 340 (445)
T ss_pred HHHHHHHHHHHHHCCEEEEEEECCCCCCCCHH---HHHHHCCCCCEEEEEEHHHCCCCCC-------------------C
T ss_conf 99999999999839999999879988872259---9998517998799985120466534-------------------7
Q ss_pred EEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHCCC
Q ss_conf 210233114676411444565212332034431025
Q gi|254780263|r 162 DTPIIRGSALCALQGTNKELGEDSIHALMKAVDTHI 197 (392)
Q Consensus 162 ~~pii~~sa~~g~~~~n~~~~~~~~~~Ll~~i~~~~ 197 (392)
T Consensus 341 ~~~~i~iSak~g----------~Gi~~L~~~i~~~~ 366 (445)
T PRK05291 341 GLPVIRISAKTG----------EGIDELEEALKQLV 366 (445)
T ss_pred CCCEEEEECCCC----------CCHHHHHHHHHHHH
T ss_conf 897599983788----------69999999999997