HHsearch alignment for GI: 254780263 and conserved domain: PRK10463
>PRK10463 hydrogenase nickel incorporation protein HypB; Provisional.
Probab=97.35 E-value=0.00011 Score=48.12 Aligned_cols=148 Identities=20% Similarity=0.232 Sum_probs=80.1
Q ss_pred CCEEEEEEEECCCCCHHHHHHHHHHHHHHHH---HCCCCCC-CCHHHH--HCCCE---EEEE-------------EEEEE
Q ss_conf 8827999990468988789999998764442---0013126-868698--62920---6378-------------99982
Q gi|254780263|r 10 KESLGLSTIGHVDHGKTTLTAAITKYYSEEK---KEYGDID-SAPEEK--LRGIT---IATA-------------HVSYE 67 (392)
Q Consensus 10 k~~~ni~~iGhvd~GKSTL~~~L~~~~~~~~---~~~~~~D-~~~~E~--~rGiT---i~~~-------------~~~~~ 67 (392)
T Consensus 102 ~gv~~lNl~sSPGSGKTtLLe~ti~~L~~~~~~aVIeGD~~T~~DA~RI~~~Gv~avQInTG~~CHLDA~MV~~al~~l~ 181 (290)
T PRK10463 102 RKQLVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQTVNDAARIRATGTPAIQVNTGKGCHLDAQMIADAAPRLP 181 (290)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCC
T ss_conf 79189993069987889999999998733675799960423566799999769958995479976759999999998489
Q ss_pred CCCEEEEEEECCCCHHHHHHHHHHHH---CCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHH
Q ss_conf 19908999847873024677987740---023314520123443321067788886318760233100233356122211
Q gi|254780263|r 68 TDKRFYSHIDCPGHADYVKNMITGAT---QADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVDAVDDDELLD 144 (392)
Q Consensus 68 ~~~~~i~iiD~PGH~~f~~~mi~g~~---~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD~v~~~~~~~ 144 (392)
T Consensus 182 l~~~dllfIENVG------NLVCPA~FDLGE~~kVvvlSVtEGeDKPlK----YP~mF~~ad~-vlinKiDLlp~~d-FD 249 (290)
T PRK10463 182 LDDNGILFIENVG------NLVCPASFDLGEKHKVAVLSVTEGEDKPLK----YPHMFAAASL-MLLNKVDLLPYLN-FD 249 (290)
T ss_pred CCCCCEEEEECCC------CCCCCCCCCCCCCEEEEEEEECCCCCCCCC----CHHHHHHCCE-EEEEHHHHHHHCC-CC
T ss_conf 8779899981278------843551203677617999970688886444----7667642578-9986565122028-89
Q ss_pred HCCCCCCEEEEEEEEEEEEECCCCEEEEE
Q ss_conf 01232100111014532210233114676
Q gi|254780263|r 145 ISEYEIRDLLKEHKYSDDTPIIRGSALCA 173 (392)
Q Consensus 145 ~i~~~i~~~l~~~~~~~~~pii~~sa~~g 173 (392)
T Consensus 250 ~~--~~~~~~~~--vNp~~~v~~vSa~tG 274 (290)
T PRK10463 250 VE--KCIACARE--VNPEIEIILISATSG 274 (290)
T ss_pred HH--HHHHHHHH--HCCCCCEEEEECCCC
T ss_conf 99--99999998--698985899756888