HHsearch alignment for GI: 254780263 and conserved domain: TIGR00073

>TIGR00073 hypB hydrogenase accessory protein HypB; InterPro: IPR004392 The hydrogenase accessory protein HypB is a GTP hydrolase for assembly of nickel metallocentre of hydrogenase. A similar protein, ureG, is an accessory protein for urease, which also uses nickel.; GO: 0016151 nickel ion binding, 0006461 protein complex assembly.
Probab=97.10  E-value=0.00052  Score=43.93  Aligned_cols=155  Identities=19%  Similarity=0.256  Sum_probs=82.0

Q ss_pred             CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHC---CCC-CCCCHHHH--HCCCE---EEEEEEE----------------
Q ss_conf             82799999046898878999999876444200---131-26868698--62920---6378999----------------
Q gi|254780263|r   11 ESLGLSTIGHVDHGKTTLTAAITKYYSEEKKE---YGD-IDSAPEEK--LRGIT---IATAHVS----------------   65 (392)
Q Consensus        11 ~~~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~---~~~-~D~~~~E~--~rGiT---i~~~~~~----------------   65 (392)
T Consensus        33 g~~~lNfmsspGSGKT~LiEk~~~~~~~~~K~Avi~GD~~t~~DA~RlR~~G~~a~~~nTGk~CHLdA~mv~G~~~~L~~  112 (225)
T TIGR00073        33 GLLVLNFMSSPGSGKTTLIEKLIERLDDEVKIAVIEGDVQTKNDADRLRKYGVPAIQINTGKECHLDAHMVAGAIHALKD  112 (225)
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHC
T ss_conf             97899802588611589999999984578978999755322556999986498688636886444016678658755421


Q ss_pred             EECCCE-EEEEEE------CCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf             821990-899984------7873024677987740023314520123443321067788886318760233100233356
Q gi|254780263|r   66 YETDKR-FYSHID------CPGHADYVKNMITGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVDAVD  138 (392)
Q Consensus        66 ~~~~~~-~i~iiD------~PGH~~f~~~mi~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD~v~  138 (392)
T Consensus       113 ~~ld~~~DlL~IENVGNLvCP~~FdL---------Ge~~rVvllSVTEGdDk~-lKyP~~F~~A---d~~~-inK~DL~~  178 (225)
T TIGR00073       113 LPLDDISDLLLIENVGNLVCPADFDL---------GEHMRVVLLSVTEGDDKV-LKYPAMFKEA---DLIL-INKVDLAE  178 (225)
T ss_pred             CCCCCCCCEEEEEECCCCEECCCCCC---------CCCCEEEEEEECCCCCCC-CCCCHHHHHH---HHHH-HCHHHHHH
T ss_conf             68887146268864476100673112---------356307999865899965-4661588744---4562-14788997


Q ss_pred             C-HHHHHHCCCCCCEEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHC
Q ss_conf             1-22211012321001110145322102331146764114445652123320344310
Q gi|254780263|r  139 D-DELLDISEYEIRDLLKEHKYSDDTPIIRGSALCALQGTNKELGEDSIHALMKAVDT  195 (392)
Q Consensus       139 ~-~~~~~~i~~~i~~~l~~~~~~~~~pii~~sa~~g~~~~n~~~~~~~~~~Ll~~i~~  195 (392)
T Consensus       179 ~v~~D~ek~~~d~~~------~nP~a~Ii~~S~ktg----------~Gl~~w~~~l~~  220 (225)
T TIGR00073       179 AVGFDVEKMKADARK------INPEAEIILVSAKTG----------KGLDEWLEFLEG  220 (225)
T ss_pred             HHCCCHHHHHHHHHH------HCCCEEEEEEECCCC----------CCHHHHHHHHHH
T ss_conf             707367899999986------289507998636897----------347899999998