HHsearch alignment for GI: 254780263 and conserved domain: TIGR01394

>TIGR01394 TypA_BipA GTP-binding protein TypA; InterPro: IPR006298 This bacterial (and Arabidopsis) protein, termed TypA or BipA, is a GTP-binding protein. It is phosphorylated on a tyrosine residue under some cellular conditions. Mutants show altered regulation of some pathways, but the precise function is unknown.; GO: 0005525 GTP binding, 0005622 intracellular.
Probab=100.00  E-value=0  Score=539.49  Aligned_cols=331  Identities=28%  Similarity=0.374  Sum_probs=292.5

Q ss_pred             EEEEEECCCCCHHHHHHHHHHHHH-H-HH----HCCCCCCCCHHHHHCCCEEEEEEEEEECCC----EEEEEEECCCCHH
Q ss_conf             999990468988789999998764-4-42----001312686869862920637899982199----0899984787302
Q gi|254780263|r   14 GLSTIGHVDHGKTTLTAAITKYYS-E-EK----KEYGDIDSAPEEKLRGITIATAHVSYETDK----RFYSHIDCPGHAD   83 (392)
Q Consensus        14 ni~~iGhvd~GKSTL~~~L~~~~~-~-~~----~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~----~~i~iiD~PGH~~   83 (392)
T Consensus         3 NIAIIAHVDHGKTTLVD~LL~Qsgf~f~~~~~~~~ER~MDSNDLErERGITILaKNTav~y~g~dG~~~INIvDTPGHAD   82 (609)
T TIGR01394         3 NIAIIAHVDHGKTTLVDALLKQSGFTFRADNEAVAERVMDSNDLERERGITILAKNTAVRYNGKDGVTKINIVDTPGHAD   82 (609)
T ss_pred             CEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCC
T ss_conf             18999880699436898888876588641588321354067652100155201300366252889718997781689887


Q ss_pred             HHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEEE---
Q ss_conf             46779877400233145201234433210677888863187602331002333561222110123210011101453---
Q gi|254780263|r   84 YVKNMITGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVDAVDDDELLDISEYEIRDLLKEHKYS---  160 (392)
Q Consensus        84 f~~~mi~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~l~~~~~~---  160 (392)
T Consensus        83 FGGEVERvL~MVDGvlLlVDA~EGPMPQTrFVL~KAL~~gLkP-IVViNKiDr--p~ARP~eV~d~vFDLF~~LgA~deQ  159 (609)
T TIGR01394        83 FGGEVERVLGMVDGVLLLVDASEGPMPQTRFVLKKALELGLKP-IVVINKIDR--PSARPDEVVDEVFDLFIELGADDEQ  159 (609)
T ss_pred             CCCEEEEECEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCE-EEEECCCCC--CCCCHHHHHHHHHHHHHHCCCCCCC
T ss_conf             8865887330240589998578889885347899999568936-999713478--8788378875787888853888001


Q ss_pred             EEEECCCCEEEEEEECCC-----CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEECCCC
Q ss_conf             221023311467641144-----456521233203443102522221000011000000013554454301487424534
Q gi|254780263|r  161 DDTPIIRGSALCALQGTN-----KELGEDSIHALMKAVDTHIPTPQRSLDAPFLMHIEGSCGIEGRGTVVTGCIKRGRIK  235 (392)
Q Consensus       161 ~~~pii~~sa~~g~~~~n-----~~~~~~~~~~Ll~~i~~~~~~p~~~~~~p~r~~I~~vf~i~g~G~Vv~GrV~sG~l~  235 (392)
T Consensus       160 LDFP~vYASa~~G~A~l~~~~dg~~~~~~~m~PLFd~I~~hvPaP~~~~d~PlQmlvt~ldy~~y~GRI~~GRv~~G~vk  239 (609)
T TIGR01394       160 LDFPIVYASARAGWASLDKDKDGLDDDSEDMAPLFDAILRHVPAPKGDLDEPLQMLVTNLDYDEYLGRIAIGRVHRGTVK  239 (609)
T ss_pred             CCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEECCCCCCCCEEEEEEEEECEEC
T ss_conf             01256766523672014466577887220178999898640688898887624210001101467766999987505654


Q ss_pred             CCCEEEEEECC-CCCCCEEEECCCCC----CCCCCCCCCCHHHHHHHCCCCCCEEECHHEEECCCCCCCCEEEEEEEEEE
Q ss_conf             89679995068-74321254121001----21144321001366641124543220211773267776300016899971
Q gi|254780263|r  236 AGSDVEIIGMG-GKKLKVKCTDVEMF----RKKLDEAIAGDNVGLLLRGVNRADVPRGRVVCAPGSIQEYSRFRASVYIL  310 (392)
Q Consensus       236 ~Gd~i~i~p~~-~~~~~~kv~si~~~----~~~v~~a~aGd~v~l~Lkgi~~~di~rGdvl~~~~~~~~~~~f~A~i~il  310 (392)
T Consensus       240 ~Gq~V~~~~~d~g~~~~~ri~~L~~f~GL~R~~~d~A~AGDIvAva--G~~--~~~IGeTiad~~~~~ALP-------~~  308 (609)
T TIGR01394       240 KGQQVALMKRDDGTIENGRISKLLGFEGLERVEIDEAGAGDIVAVA--GLE--DINIGETIADPEAPEALP-------LI  308 (609)
T ss_pred             CCCEEEEEECCCCEEEEEEEEEEEECCCCEEEECCCCCCCCEEEEE--CCC--CCCCCCEECCCCCCCCCC-------CC
T ss_conf             6864798724696897777645420157110004557987789990--779--887352113333467887-------11


Q ss_pred             ECCCCCCCCCCCCCCEEEEEEC-CEEEEEEEEECCCHHHHCCCCEEEEE
Q ss_conf             0567875555115978999954-14777999961895570789769999
Q gi|254780263|r  311 TASEGGRTTGFMDNYRPQFFMD-TADVTGRIILSPGSQAVMPGDRVDLE  358 (392)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~i~~~~~~~~i~~g~~~~v~  358 (392)
T Consensus       309 ~vDEPT~sMtF~vN~SPlAG~EVGk~VTSR~i~dRL~rEL~~NvALrVe  357 (609)
T TIGR01394       309 TVDEPTLSMTFSVNDSPLAGKEVGKFVTSRQIRDRLERELETNVALRVE  357 (609)
T ss_pred             CCCCCCEEEEEEECCCCCCCCCCCCEECCCCHHHHHHHHHHCCCEEEEE
T ss_conf             2588812899875288765532573032441578999986317145640