HHsearch alignment for GI: 254780263 and conserved domain: TIGR01394
>TIGR01394 TypA_BipA GTP-binding protein TypA; InterPro: IPR006298 This bacterial (and Arabidopsis) protein, termed TypA or BipA, is a GTP-binding protein. It is phosphorylated on a tyrosine residue under some cellular conditions. Mutants show altered regulation of some pathways, but the precise function is unknown.; GO: 0005525 GTP binding, 0005622 intracellular.
Probab=100.00 E-value=0 Score=539.49 Aligned_cols=331 Identities=28% Similarity=0.374 Sum_probs=292.5
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHH-H-HH----HCCCCCCCCHHHHHCCCEEEEEEEEEECCC----EEEEEEECCCCHH
Q ss_conf 999990468988789999998764-4-42----001312686869862920637899982199----0899984787302
Q gi|254780263|r 14 GLSTIGHVDHGKTTLTAAITKYYS-E-EK----KEYGDIDSAPEEKLRGITIATAHVSYETDK----RFYSHIDCPGHAD 83 (392)
Q Consensus 14 ni~~iGhvd~GKSTL~~~L~~~~~-~-~~----~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~----~~i~iiD~PGH~~ 83 (392)
T Consensus 3 NIAIIAHVDHGKTTLVD~LL~Qsgf~f~~~~~~~~ER~MDSNDLErERGITILaKNTav~y~g~dG~~~INIvDTPGHAD 82 (609)
T TIGR01394 3 NIAIIAHVDHGKTTLVDALLKQSGFTFRADNEAVAERVMDSNDLERERGITILAKNTAVRYNGKDGVTKINIVDTPGHAD 82 (609)
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCC
T ss_conf 18999880699436898888876588641588321354067652100155201300366252889718997781689887
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEEE---
Q ss_conf 46779877400233145201234433210677888863187602331002333561222110123210011101453---
Q gi|254780263|r 84 YVKNMITGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVDAVDDDELLDISEYEIRDLLKEHKYS--- 160 (392)
Q Consensus 84 f~~~mi~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~l~~~~~~--- 160 (392)
T Consensus 83 FGGEVERvL~MVDGvlLlVDA~EGPMPQTrFVL~KAL~~gLkP-IVViNKiDr--p~ARP~eV~d~vFDLF~~LgA~deQ 159 (609)
T TIGR01394 83 FGGEVERVLGMVDGVLLLVDASEGPMPQTRFVLKKALELGLKP-IVVINKIDR--PSARPDEVVDEVFDLFIELGADDEQ 159 (609)
T ss_pred CCCEEEEECEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCE-EEEECCCCC--CCCCHHHHHHHHHHHHHHCCCCCCC
T ss_conf 8865887330240589998578889885347899999568936-999713478--8788378875787888853888001
Q ss_pred EEEECCCCEEEEEEECCC-----CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEECCCC
Q ss_conf 221023311467641144-----456521233203443102522221000011000000013554454301487424534
Q gi|254780263|r 161 DDTPIIRGSALCALQGTN-----KELGEDSIHALMKAVDTHIPTPQRSLDAPFLMHIEGSCGIEGRGTVVTGCIKRGRIK 235 (392)
Q Consensus 161 ~~~pii~~sa~~g~~~~n-----~~~~~~~~~~Ll~~i~~~~~~p~~~~~~p~r~~I~~vf~i~g~G~Vv~GrV~sG~l~ 235 (392)
T Consensus 160 LDFP~vYASa~~G~A~l~~~~dg~~~~~~~m~PLFd~I~~hvPaP~~~~d~PlQmlvt~ldy~~y~GRI~~GRv~~G~vk 239 (609)
T TIGR01394 160 LDFPIVYASARAGWASLDKDKDGLDDDSEDMAPLFDAILRHVPAPKGDLDEPLQMLVTNLDYDEYLGRIAIGRVHRGTVK 239 (609)
T ss_pred CCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEECCCCCCCCEEEEEEEEECEEC
T ss_conf 01256766523672014466577887220178999898640688898887624210001101467766999987505654
Q ss_pred CCCEEEEEECC-CCCCCEEEECCCCC----CCCCCCCCCCHHHHHHHCCCCCCEEECHHEEECCCCCCCCEEEEEEEEEE
Q ss_conf 89679995068-74321254121001----21144321001366641124543220211773267776300016899971
Q gi|254780263|r 236 AGSDVEIIGMG-GKKLKVKCTDVEMF----RKKLDEAIAGDNVGLLLRGVNRADVPRGRVVCAPGSIQEYSRFRASVYIL 310 (392)
Q Consensus 236 ~Gd~i~i~p~~-~~~~~~kv~si~~~----~~~v~~a~aGd~v~l~Lkgi~~~di~rGdvl~~~~~~~~~~~f~A~i~il 310 (392)
T Consensus 240 ~Gq~V~~~~~d~g~~~~~ri~~L~~f~GL~R~~~d~A~AGDIvAva--G~~--~~~IGeTiad~~~~~ALP-------~~ 308 (609)
T TIGR01394 240 KGQQVALMKRDDGTIENGRISKLLGFEGLERVEIDEAGAGDIVAVA--GLE--DINIGETIADPEAPEALP-------LI 308 (609)
T ss_pred CCCEEEEEECCCCEEEEEEEEEEEECCCCEEEECCCCCCCCEEEEE--CCC--CCCCCCEECCCCCCCCCC-------CC
T ss_conf 6864798724696897777645420157110004557987789990--779--887352113333467887-------11
Q ss_pred ECCCCCCCCCCCCCCEEEEEEC-CEEEEEEEEECCCHHHHCCCCEEEEE
Q ss_conf 0567875555115978999954-14777999961895570789769999
Q gi|254780263|r 311 TASEGGRTTGFMDNYRPQFFMD-TADVTGRIILSPGSQAVMPGDRVDLE 358 (392)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~i~~~~~~~~i~~g~~~~v~ 358 (392)
T Consensus 309 ~vDEPT~sMtF~vN~SPlAG~EVGk~VTSR~i~dRL~rEL~~NvALrVe 357 (609)
T TIGR01394 309 TVDEPTLSMTFSVNDSPLAGKEVGKFVTSRQIRDRLERELETNVALRVE 357 (609)
T ss_pred CCCCCCEEEEEEECCCCCCCCCCCCEECCCCHHHHHHHHHHCCCEEEEE
T ss_conf 2588812899875288765532573032441578999986317145640