HHsearch alignment for GI: 254780263 and conserved domain: TIGR02729
>TIGR02729 Obg_CgtA GTP-binding protein Obg/CgtA; InterPro: IPR014100 This entry describes a universal, mostly one-gene-per-genome GTP-binding protein that associates with ribosomal subunits and appears to play a role in ribosomal RNA maturation. Mutations in this gene are pleiotropic, but it appears that effects on cellular functions such as chromosome partition may be secondary to the effect on ribosome structure..
Probab=98.98 E-value=4.6e-09 Score=75.27 Aligned_cols=110 Identities=19% Similarity=0.249 Sum_probs=74.6
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECCC--EEEEEEECCC-----CH----
Q ss_conf 999990468988789999998764442001312686869862920637899982199--0899984787-----30----
Q gi|254780263|r 14 GLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYETDK--RFYSHIDCPG-----HA---- 82 (392)
Q Consensus 14 ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~--~~i~iiD~PG-----H~---- 82 (392)
T Consensus 160 DVGLvGfPNAGKSTLLs~~S~AkPKiAd---YPFTT-------L~P~LGvv~~~~~~Y~~~fviADIPGLIEGAs~G~GL 229 (296)
T TIGR02729 160 DVGLVGFPNAGKSTLLSAISNAKPKIAD---YPFTT-------LEPNLGVVRVDDNKYERSFVIADIPGLIEGASEGKGL 229 (296)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCEECC---CCCCC-------CCCCEEEEEECCCCEEEEEEEEECCCCHHHHHCCCCC
T ss_conf 0210357887468888887627882238---78745-------6531128987487416889998568615666268875
Q ss_pred --HHHHHHHHHHHCCCCEEEEECCCCC-----CCCCHHHHHH-HHHH-------CCCCCEEEEECCCCCC
Q ss_conf --2467798774002331452012344-----3321067788-8863-------1876023310023335
Q gi|254780263|r 83 --DYVKNMITGATQADGAILVCAAEDG-----PKPQTREHIL-LARQ-------IGISSIVVYMNKVDAV 137 (392)
Q Consensus 83 --~f~~~mi~g~~~~D~ailvVda~~G-----~~~QT~eh~~-l~~~-------lgi~~iIv~iNKmD~v 137 (392)
T Consensus 230 G~~FLKHIER----t~~L~hviD~~~~qlSkh~~~~p~~~y~~l~~EL~~Y~~~L~~k~~~iv~NK~Dl~ 295 (296)
T TIGR02729 230 GHKFLKHIER----TRLLLHVIDASGIQLSKHDGRDPIEDYETLRNELELYSPELADKPQIIVLNKIDLL 295 (296)
T ss_pred CHHHHHHHHH----EEEEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHCCCCEEEEEEECCCC
T ss_conf 3355457520----26688798068753424289888999999999997508736278079998606778