HHsearch alignment for GI: 254780263 and conserved domain: cd01868

>cd01868 Rab11_like Rab11-like. Rab11a, Rab11b, and Rab25 are closely related, evolutionary conserved Rab proteins that are differentially expressed. Rab11a is ubiquitously synthesized, Rab11b is enriched in brain and heart and Rab25 is only found in epithelia. Rab11/25 proteins seem to regulate recycling pathways from endosomes to the plasma membrane and to the trans-Golgi network. Furthermore, Rab11a is thought to function in the histamine-induced fusion of tubulovesicles containing H+, K+ ATPase with the plasma membrane in gastric parietal cells and in insulin-stimulated insertion of GLUT4 in the plasma membrane of cardiomyocytes. Overexpression of Rab25 has recently been observed in ovarian cancer and breast cancer, and has been correlated with worsened outcomes in both diseases. In addition, Rab25 overexpression has also been observed in prostate cancer, transitional cell carcinoma of the bladder, and invasive breast tumor cells. GTPase activating proteins (GAPs) interact with GTP
Probab=98.80  E-value=1.8e-08  Score=71.55  Aligned_cols=141  Identities=22%  Similarity=0.176  Sum_probs=80.6

Q ss_pred             EEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEE--EEEEEEEECC--CEEEEEEECCCCHHHHHHH
Q ss_conf             79999904689887899999987644420013126868698629206--3789998219--9089998478730246779
Q gi|254780263|r   13 LGLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITI--ATAHVSYETD--KRFYSHIDCPGHADYVKNM   88 (392)
Q Consensus        13 ~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi--~~~~~~~~~~--~~~i~iiD~PGH~~f~~~m   88 (392)
T Consensus         4 ~Kiv~iGd~~VGKTsli~r~~~~------------~f~~~~~--~Tig~~~~~k~i~~~~~~~~l~iwDtaG~e~~~~~~   69 (165)
T cd01868           4 FKIVLIGDSGVGKSNLLSRFTRN------------EFNLDSK--STIGVEFATRSIQIDGKTIKAQIWDTAGQERYRAIT   69 (165)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHC------------CCCCCCC--CCCCEEEEEEEEEECCEEEEEEEEECCCCHHHHHHH
T ss_conf             89999999997899999999729------------8999889--874478789999999999999999899972126789


Q ss_pred             HHHHHCCCCEEEEECCCCCCCCCHHHH-HHHHHHC---CCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEEEEEEE
Q ss_conf             877400233145201234433210677-8888631---876023310023335612221101232100111014532210
Q gi|254780263|r   89 ITGATQADGAILVCAAEDGPKPQTREH-ILLARQI---GISSIVVYMNKVDAVDDDELLDISEYEIRDLLKEHKYSDDTP  164 (392)
Q Consensus        89 i~g~~~~D~ailvVda~~G~~~QT~eh-~~l~~~l---gi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~l~~~~~~~~~p  164 (392)
T Consensus        70 ~~~~~~a~~~ilvydit~~~Sf~~i~~w~~~i~~~~~~~~~-iilVgnK~DL~~~r~---Vs~~e~~~~a~~~----~~~  141 (165)
T cd01868          70 SAYYRGAVGALLVYDITKKQTFENVERWLKELRDHADSNIV-IMLVGNKSDLRHLRA---VPTEEAKAFAEKN----GLS  141 (165)
T ss_pred             HHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCE-EEEECCCCCHHHHCC---CCHHHHHHHHHHC----CCE
T ss_conf             98733205148986269889999999999999985557735-987023478688578---8899999999985----997


Q ss_pred             CCCCEEEEEEE
Q ss_conf             23311467641
Q gi|254780263|r  165 IIRGSALCALQ  175 (392)
Q Consensus       165 ii~~sa~~g~~  175 (392)
T Consensus       142 ~~E~SAk~g~n  152 (165)
T cd01868         142 FIETSALDGTN  152 (165)
T ss_pred             EEEECCCCCCC
T ss_conf             99967888929