HHsearch alignment for GI: 254780263 and conserved domain: cd01876

>cd01876 YihA_EngB The YihA (EngB) subfamily. This subfamily of GTPases is typified by the E. coli YihA, an essential protein involved in cell division control. YihA and its orthologs are small proteins that typically contain less than 200 amino acid residues and consists of the GTPase domain only (some of the eukaryotic homologs contain an N-terminal extension of about 120 residues that might be involved in organellar targeting). Homologs of yihA are found in most Gram-positive and Gram-negative pathogenic bacteria, with the exception of Mycobacterium tuberculosis. The broad-spectrum nature of YihA and its essentiality for cell viability in bacteria make it an attractive antibacterial target.
Probab=99.81  E-value=9.5e-20  Score=141.50  Aligned_cols=155  Identities=23%  Similarity=0.363  Sum_probs=105.2

Q ss_pred             EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECCCEEEEEEECCCC-------------
Q ss_conf             9999046898878999999876444200131268686986292063789998219908999847873-------------
Q gi|254780263|r   15 LSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYETDKRFYSHIDCPGH-------------   81 (392)
Q Consensus        15 i~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~~~i~iiD~PGH-------------   81 (392)
T Consensus         2 IaivG~pN~GKSTL~N~L~~~~~-----~~~vs-----~~~gtTr~i~~--~~~-~~~~~~vDtPG~g~~~~~~~~~~~~   68 (170)
T cd01876           2 IAFAGRSNVGKSSLINALTNRKK-----LARTS-----KTPGKTQLINF--FNV-NDKFRLVDLPGYGYAKVSKEVKEKW   68 (170)
T ss_pred             EEEECCCCCCHHHHHHHHHCCCC-----EEEEE-----CCCCEEEEEEE--EEE-CCEEEEEECCCCHHCCCCHHHHHHH
T ss_conf             89998999999999999968996-----27860-----78977852058--853-8779999657840101687799999


Q ss_pred             HHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEEEE
Q ss_conf             02467798774002331452012344332106778888631876023310023335612221101232100111014532
Q gi|254780263|r   82 ADYVKNMITGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVDAVDDDELLDISEYEIRDLLKEHKYSD  161 (392)
Q Consensus        82 ~~f~~~mi~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~l~~~~~~~  161 (392)
T Consensus        69 ~~~~~~~l~~~~~~~~vi~viD~~~~~~~~d~~i~~~l~~~~kp-~iiVlNKiDlv~~~~~~~~~~-~~~~~l~~~--~~  144 (170)
T cd01876          69 GKLIEEYLENRENLKGVVLLIDSRHGPTEIDLEMLDWLEELGIP-FLVVLTKADKLKKSELAKALK-EIKKELKLF--EI  144 (170)
T ss_pred             HHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCC-EEEEEEEEECCCHHHHHHHHH-HHHHHHHCC--CC
T ss_conf             99999999840633499999963223748689999999876998-799998675378778999999-999987421--79


Q ss_pred             EEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHCC
Q ss_conf             21023311467641144456521233203443102
Q gi|254780263|r  162 DTPIIRGSALCALQGTNKELGEDSIHALMKAVDTH  196 (392)
Q Consensus       162 ~~pii~~sa~~g~~~~n~~~~~~~~~~Ll~~i~~~  196 (392)
T Consensus       145 ~~~ii~iSA~~g----------~gi~~L~~~I~~~  169 (170)
T cd01876         145 DPPIILFSSLKG----------QGIDELRALIEKW  169 (170)
T ss_pred             CCEEEEEECCCC----------CCHHHHHHHHHHH
T ss_conf             983999988999----------7799999999985