HHsearch alignment for GI: 254780263 and conserved domain: cd02036
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=96.96 E-value=0.0049 Score=37.92 Aligned_cols=120 Identities=23% Similarity=0.219 Sum_probs=67.3
Q ss_pred EEEE-ECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHH----HHHCCCEEEEEEEEEECCCEEEEEEECCCCHHHHHHHH
Q ss_conf 9999-046898878999999876444200131268686----98629206378999821990899984787302467798
Q gi|254780263|r 15 LSTI-GHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPE----EKLRGITIATAHVSYETDKRFYSHIDCPGHADYVKNMI 89 (392)
Q Consensus 15 i~~i-Ghvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~----E~~rGiTi~~~~~~~~~~~~~i~iiD~PGH~~f~~~mi 89 (392)
T Consensus 2 Iav~s~KGGVGKTT~a~NLA~aLa~~g~~vllvD~D~~~~~l~~~~~~~~~~~~~~~~vl~gD~viiD~ppg--~~~~~~ 79 (179)
T cd02036 2 IVVTSGKGGVGKTTTTANLGTALAQLGYKVVLIDADLGLRNLDLILGLENRVVYTLHDVLAGDYILIDSPAG--IERGFI 79 (179)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCCHHHCCCCCCEEEEECCCC--CCHHHH
T ss_conf 899739998709999999999999779918999589999983666176556653131126699999979999--888999
Q ss_pred HHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCC
Q ss_conf 77400233145201234433210677888863187602331002333
Q gi|254780263|r 90 TGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVDA 136 (392)
Q Consensus 90 ~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD~ 136 (392)
T Consensus 80 ~~l~~ad~vlvv~~p~~~sl~~~~~~~~~~~~~~~~~~~vv~Nr~~~ 126 (179)
T cd02036 80 TAIAPADEALLVTTPEISSLRDADRVKGLLEALGIKVVGVIVNRVRP 126 (179)
T ss_pred HHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf 99984681256378858899999999999982599646999845467